Gene : Brara.C02396 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR24128:SF14 - E3 UBIQUITIN-PROTEIN LIGASE XBAT31-RELATED Genomic Order:  2396
Name:  ? Brara.C02396 Secondary Identifier:  ? PAC:30615586
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02396 0.5kb upstream 0.5kb upstream 2787 true A03: 11994929-11997715 Brassica rapa FPsc
Brara.C02396 0.5kb upstream 0.5kb upstream 500 false A03: 11997216-11997715 Brassica rapa FPsc
Brara.C02396 0.5kb downstream 0.5kb downstream 2787 true A03: 11994429-11997215 Brassica rapa FPsc
Brara.C02396 0.5kb downstream 0.5kb downstream 500 false A03: 11994429-11994928 Brassica rapa FPsc
Brara.C02396 1.0kb upstream 1.0kb upstream 3287 true A03: 11994929-11998215 Brassica rapa FPsc
Brara.C02396 1.0kb upstream 1.0kb upstream 1000 false A03: 11997216-11998215 Brassica rapa FPsc
Brara.C02396 1.0kb downstream 1.0kb downstream 3287 true A03: 11993929-11997215 Brassica rapa FPsc
Brara.C02396 1.0kb downstream 1.0kb downstream 1000 false A03: 11993929-11994928 Brassica rapa FPsc
Brara.C02396 2.0kb upstream 2.0kb upstream 4287 true A03: 11994929-11999215 Brassica rapa FPsc
Brara.C02396 2.0kb upstream 2.0kb upstream 2000 false A03: 11997216-11999215 Brassica rapa FPsc
Brara.C02396 2.0kb downstream 2.0kb downstream 4287 true A03: 11992929-11997215 Brassica rapa FPsc
Brara.C02396 2.0kb downstream 2.0kb downstream 2000 false A03: 11992929-11994928 Brassica rapa FPsc
Brara.C02396 5.0kb upstream 5.0kb upstream 7287 true A03: 11994929-12002215 Brassica rapa FPsc
Brara.C02396 5.0kb upstream 5.0kb upstream 5000 false A03: 11997216-12002215 Brassica rapa FPsc
Brara.C02396 5.0kb downstream 5.0kb downstream 7287 true A03: 11989929-11997215 Brassica rapa FPsc
Brara.C02396 5.0kb downstream 5.0kb downstream 5000 false A03: 11989929-11994928 Brassica rapa FPsc
Brara.C02396 10.0kb upstream 10.0kb upstream 12287 true A03: 11994929-12007215 Brassica rapa FPsc
Brara.C02396 10.0kb upstream 10.0kb upstream 10000 false A03: 11997216-12007215 Brassica rapa FPsc
Brara.C02396 10.0kb downstream 10.0kb downstream 12287 true A03: 11984929-11997215 Brassica rapa FPsc
Brara.C02396 10.0kb downstream 10.0kb downstream 10000 false A03: 11984929-11994928 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371594 5261 Brassicaceae View MSA
123828966 5264 Brassicales-Malvales View MSA
124336399 5266 SBM View MSA
124253470 5268 Malvidae View MSA
124067649 5270 Rosid View MSA
123746800 5271 Pentapetalae View MSA
122791790 5272 Eudicot View MSA
122045782 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121344984 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier