Gene : Brara.E02977 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11404:SF6 - SUPEROXIDE DISMUTASE [MN], MITOCHONDRIAL Genomic Order:  2977
Name:  ? Brara.E02977 Secondary Identifier:  ? PAC:30624712
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc DETOX1-PWY Brassica rapa FPsc pathologic  
BrapaFPsc DETOX1-PWY-1 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6854 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02977 0.5kb upstream 0.5kb upstream 2070 true A05: 25055960-25058029 Brassica rapa FPsc
Brara.E02977 0.5kb upstream 0.5kb upstream 500 false A05: 25057530-25058029 Brassica rapa FPsc
Brara.E02977 0.5kb downstream 0.5kb downstream 2070 true A05: 25055460-25057529 Brassica rapa FPsc
Brara.E02977 0.5kb downstream 0.5kb downstream 500 false A05: 25055460-25055959 Brassica rapa FPsc
Brara.E02977 1.0kb upstream 1.0kb upstream 2570 true A05: 25055960-25058529 Brassica rapa FPsc
Brara.E02977 1.0kb upstream 1.0kb upstream 1000 false A05: 25057530-25058529 Brassica rapa FPsc
Brara.E02977 1.0kb downstream 1.0kb downstream 2570 true A05: 25054960-25057529 Brassica rapa FPsc
Brara.E02977 1.0kb downstream 1.0kb downstream 1000 false A05: 25054960-25055959 Brassica rapa FPsc
Brara.E02977 2.0kb upstream 2.0kb upstream 3570 true A05: 25055960-25059529 Brassica rapa FPsc
Brara.E02977 2.0kb upstream 2.0kb upstream 2000 false A05: 25057530-25059529 Brassica rapa FPsc
Brara.E02977 2.0kb downstream 2.0kb downstream 3570 true A05: 25053960-25057529 Brassica rapa FPsc
Brara.E02977 2.0kb downstream 2.0kb downstream 2000 false A05: 25053960-25055959 Brassica rapa FPsc
Brara.E02977 5.0kb upstream 5.0kb upstream 6570 true A05: 25055960-25062529 Brassica rapa FPsc
Brara.E02977 5.0kb upstream 5.0kb upstream 5000 false A05: 25057530-25062529 Brassica rapa FPsc
Brara.E02977 5.0kb downstream 5.0kb downstream 6570 true A05: 25050960-25057529 Brassica rapa FPsc
Brara.E02977 5.0kb downstream 5.0kb downstream 5000 false A05: 25050960-25055959 Brassica rapa FPsc
Brara.E02977 10.0kb upstream 10.0kb upstream 11570 true A05: 25055960-25067529 Brassica rapa FPsc
Brara.E02977 10.0kb upstream 10.0kb upstream 10000 false A05: 25057530-25067529 Brassica rapa FPsc
Brara.E02977 10.0kb downstream 10.0kb downstream 11570 true A05: 25045960-25057529 Brassica rapa FPsc
Brara.E02977 10.0kb downstream 10.0kb downstream 10000 false A05: 25045960-25055959 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377659 5261 Brassicaceae View MSA
123838385 5264 Brassicales-Malvales View MSA
124322443 5266 SBM View MSA
124240779 5268 Malvidae View MSA
124073146 5270 Rosid View MSA
123736738 5271 Pentapetalae View MSA
122792658 5272 Eudicot View MSA
122050195 5273 Angiosperm View MSA
121345064 5274 Embryophyte View MSA
123426666 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier