Gene : Brara.C02411 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31945:SF17 - TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR Genomic Order:  2411
Name:  ? Brara.C02411 Secondary Identifier:  ? PAC:30616017
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02411 0.5kb upstream 0.5kb upstream 2034 true A03: 12086167-12088200 Brassica rapa FPsc
Brara.C02411 0.5kb upstream 0.5kb upstream 500 false A03: 12087701-12088200 Brassica rapa FPsc
Brara.C02411 0.5kb downstream 0.5kb downstream 2034 true A03: 12085667-12087700 Brassica rapa FPsc
Brara.C02411 0.5kb downstream 0.5kb downstream 500 false A03: 12085667-12086166 Brassica rapa FPsc
Brara.C02411 1.0kb upstream 1.0kb upstream 2534 true A03: 12086167-12088700 Brassica rapa FPsc
Brara.C02411 1.0kb upstream 1.0kb upstream 1000 false A03: 12087701-12088700 Brassica rapa FPsc
Brara.C02411 1.0kb downstream 1.0kb downstream 2534 true A03: 12085167-12087700 Brassica rapa FPsc
Brara.C02411 1.0kb downstream 1.0kb downstream 1000 false A03: 12085167-12086166 Brassica rapa FPsc
Brara.C02411 2.0kb upstream 2.0kb upstream 3534 true A03: 12086167-12089700 Brassica rapa FPsc
Brara.C02411 2.0kb upstream 2.0kb upstream 2000 false A03: 12087701-12089700 Brassica rapa FPsc
Brara.C02411 2.0kb downstream 2.0kb downstream 3534 true A03: 12084167-12087700 Brassica rapa FPsc
Brara.C02411 2.0kb downstream 2.0kb downstream 2000 false A03: 12084167-12086166 Brassica rapa FPsc
Brara.C02411 5.0kb upstream 5.0kb upstream 6534 true A03: 12086167-12092700 Brassica rapa FPsc
Brara.C02411 5.0kb upstream 5.0kb upstream 5000 false A03: 12087701-12092700 Brassica rapa FPsc
Brara.C02411 5.0kb downstream 5.0kb downstream 6534 true A03: 12081167-12087700 Brassica rapa FPsc
Brara.C02411 5.0kb downstream 5.0kb downstream 5000 false A03: 12081167-12086166 Brassica rapa FPsc
Brara.C02411 10.0kb upstream 10.0kb upstream 11534 true A03: 12086167-12097700 Brassica rapa FPsc
Brara.C02411 10.0kb upstream 10.0kb upstream 10000 false A03: 12087701-12097700 Brassica rapa FPsc
Brara.C02411 10.0kb downstream 10.0kb downstream 11534 true A03: 12076167-12087700 Brassica rapa FPsc
Brara.C02411 10.0kb downstream 10.0kb downstream 10000 false A03: 12076167-12086166 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347091 5261 Brassicaceae Singleton cluster - no MSA
123786676 5264 Brassicales-Malvales Singleton cluster - no MSA
124284776 5266 SBM Singleton cluster - no MSA
124250842 5268 Malvidae View MSA
124063939 5270 Rosid View MSA
123751108 5271 Pentapetalae View MSA
122786692 5272 Eudicot View MSA
122047827 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier