Gene : Brara.C02414 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11353:SF11 - CHAPERONIN 60 SUBUNIT ALPHA 1, CHLOROPLASTIC Genomic Order:  2414
Name:  ? Brara.C02414 Secondary Identifier:  ? PAC:30617853
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02414 0.5kb upstream 0.5kb upstream 3069 true A03: 12125201-12128269 Brassica rapa FPsc
Brara.C02414 0.5kb upstream 0.5kb upstream 500 false A03: 12127770-12128269 Brassica rapa FPsc
Brara.C02414 0.5kb downstream 0.5kb downstream 3069 true A03: 12124701-12127769 Brassica rapa FPsc
Brara.C02414 0.5kb downstream 0.5kb downstream 500 false A03: 12124701-12125200 Brassica rapa FPsc
Brara.C02414 1.0kb upstream 1.0kb upstream 3569 true A03: 12125201-12128769 Brassica rapa FPsc
Brara.C02414 1.0kb upstream 1.0kb upstream 1000 false A03: 12127770-12128769 Brassica rapa FPsc
Brara.C02414 1.0kb downstream 1.0kb downstream 3569 true A03: 12124201-12127769 Brassica rapa FPsc
Brara.C02414 1.0kb downstream 1.0kb downstream 1000 false A03: 12124201-12125200 Brassica rapa FPsc
Brara.C02414 2.0kb upstream 2.0kb upstream 4569 true A03: 12125201-12129769 Brassica rapa FPsc
Brara.C02414 2.0kb upstream 2.0kb upstream 2000 false A03: 12127770-12129769 Brassica rapa FPsc
Brara.C02414 2.0kb downstream 2.0kb downstream 4569 true A03: 12123201-12127769 Brassica rapa FPsc
Brara.C02414 2.0kb downstream 2.0kb downstream 2000 false A03: 12123201-12125200 Brassica rapa FPsc
Brara.C02414 5.0kb upstream 5.0kb upstream 7569 true A03: 12125201-12132769 Brassica rapa FPsc
Brara.C02414 5.0kb upstream 5.0kb upstream 5000 false A03: 12127770-12132769 Brassica rapa FPsc
Brara.C02414 5.0kb downstream 5.0kb downstream 7569 true A03: 12120201-12127769 Brassica rapa FPsc
Brara.C02414 5.0kb downstream 5.0kb downstream 5000 false A03: 12120201-12125200 Brassica rapa FPsc
Brara.C02414 10.0kb upstream 10.0kb upstream 12569 true A03: 12125201-12137769 Brassica rapa FPsc
Brara.C02414 10.0kb upstream 10.0kb upstream 10000 false A03: 12127770-12137769 Brassica rapa FPsc
Brara.C02414 10.0kb downstream 10.0kb downstream 12569 true A03: 12115201-12127769 Brassica rapa FPsc
Brara.C02414 10.0kb downstream 10.0kb downstream 10000 false A03: 12115201-12125200 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347618 5261 Brassicaceae Singleton cluster - no MSA
123787113 5264 Brassicales-Malvales Singleton cluster - no MSA
124350208 5266 SBM View MSA
124249848 5268 Malvidae View MSA
124066772 5270 Rosid View MSA
123747305 5271 Pentapetalae View MSA
122795365 5272 Eudicot View MSA
122048196 5273 Angiosperm View MSA
121346372 5274 Embryophyte View MSA
123427883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier