Gene : Brara.C02464 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR21266:SF29 - PROTEIN TIC 55, CHLOROPLASTIC Genomic Order:  2464
Name:  ? Brara.C02464 Secondary Identifier:  ? PAC:30615756
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5098 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6927 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02464 0.5kb upstream 0.5kb upstream 2730 true A03: 12388790-12391519 Brassica rapa FPsc
Brara.C02464 0.5kb upstream 0.5kb upstream 500 false A03: 12388790-12389289 Brassica rapa FPsc
Brara.C02464 0.5kb downstream 0.5kb downstream 2730 true A03: 12389290-12392019 Brassica rapa FPsc
Brara.C02464 0.5kb downstream 0.5kb downstream 500 false A03: 12391520-12392019 Brassica rapa FPsc
Brara.C02464 1.0kb upstream 1.0kb upstream 3230 true A03: 12388290-12391519 Brassica rapa FPsc
Brara.C02464 1.0kb upstream 1.0kb upstream 1000 false A03: 12388290-12389289 Brassica rapa FPsc
Brara.C02464 1.0kb downstream 1.0kb downstream 3230 true A03: 12389290-12392519 Brassica rapa FPsc
Brara.C02464 1.0kb downstream 1.0kb downstream 1000 false A03: 12391520-12392519 Brassica rapa FPsc
Brara.C02464 2.0kb upstream 2.0kb upstream 4230 true A03: 12387290-12391519 Brassica rapa FPsc
Brara.C02464 2.0kb upstream 2.0kb upstream 2000 false A03: 12387290-12389289 Brassica rapa FPsc
Brara.C02464 2.0kb downstream 2.0kb downstream 4230 true A03: 12389290-12393519 Brassica rapa FPsc
Brara.C02464 2.0kb downstream 2.0kb downstream 2000 false A03: 12391520-12393519 Brassica rapa FPsc
Brara.C02464 5.0kb upstream 5.0kb upstream 7230 true A03: 12384290-12391519 Brassica rapa FPsc
Brara.C02464 5.0kb upstream 5.0kb upstream 5000 false A03: 12384290-12389289 Brassica rapa FPsc
Brara.C02464 5.0kb downstream 5.0kb downstream 7230 true A03: 12389290-12396519 Brassica rapa FPsc
Brara.C02464 5.0kb downstream 5.0kb downstream 5000 false A03: 12391520-12396519 Brassica rapa FPsc
Brara.C02464 10.0kb upstream 10.0kb upstream 12230 true A03: 12379290-12391519 Brassica rapa FPsc
Brara.C02464 10.0kb upstream 10.0kb upstream 10000 false A03: 12379290-12389289 Brassica rapa FPsc
Brara.C02464 10.0kb downstream 10.0kb downstream 12230 true A03: 12389290-12401519 Brassica rapa FPsc
Brara.C02464 10.0kb downstream 10.0kb downstream 10000 false A03: 12391520-12401519 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370406 5261 Brassicaceae View MSA
123833788 5264 Brassicales-Malvales View MSA
124343991 5266 SBM View MSA
124246740 5268 Malvidae View MSA
124068769 5270 Rosid View MSA
123736792 5271 Pentapetalae View MSA
122790775 5272 Eudicot View MSA
122046854 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121343903 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier