Gene : Brara.J02567 B. rapa FPsc v1.3

Defline:  (1 of 11) PF01535//PF12854//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2567
Name:  ? Brara.J02567 Secondary Identifier:  ? PAC:30613001

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02567 0.5kb upstream 0.5kb upstream 4337 true A10: 18301027-18305363 Brassica rapa FPsc
Brara.J02567 0.5kb upstream 0.5kb upstream 500 false A10: 18301027-18301526 Brassica rapa FPsc
Brara.J02567 0.5kb downstream 0.5kb downstream 4337 true A10: 18301527-18305863 Brassica rapa FPsc
Brara.J02567 0.5kb downstream 0.5kb downstream 500 false A10: 18305364-18305863 Brassica rapa FPsc
Brara.J02567 1.0kb upstream 1.0kb upstream 4837 true A10: 18300527-18305363 Brassica rapa FPsc
Brara.J02567 1.0kb upstream 1.0kb upstream 1000 false A10: 18300527-18301526 Brassica rapa FPsc
Brara.J02567 1.0kb downstream 1.0kb downstream 4837 true A10: 18301527-18306363 Brassica rapa FPsc
Brara.J02567 1.0kb downstream 1.0kb downstream 1000 false A10: 18305364-18306363 Brassica rapa FPsc
Brara.J02567 2.0kb upstream 2.0kb upstream 5837 true A10: 18299527-18305363 Brassica rapa FPsc
Brara.J02567 2.0kb upstream 2.0kb upstream 2000 false A10: 18299527-18301526 Brassica rapa FPsc
Brara.J02567 2.0kb downstream 2.0kb downstream 5837 true A10: 18301527-18307363 Brassica rapa FPsc
Brara.J02567 2.0kb downstream 2.0kb downstream 2000 false A10: 18305364-18307363 Brassica rapa FPsc
Brara.J02567 5.0kb upstream 5.0kb upstream 8837 true A10: 18296527-18305363 Brassica rapa FPsc
Brara.J02567 5.0kb upstream 5.0kb upstream 5000 false A10: 18296527-18301526 Brassica rapa FPsc
Brara.J02567 5.0kb downstream 5.0kb downstream 8837 true A10: 18301527-18310363 Brassica rapa FPsc
Brara.J02567 5.0kb downstream 5.0kb downstream 5000 false A10: 18305364-18310363 Brassica rapa FPsc
Brara.J02567 10.0kb upstream 10.0kb upstream 13837 true A10: 18291527-18305363 Brassica rapa FPsc
Brara.J02567 10.0kb upstream 10.0kb upstream 10000 false A10: 18291527-18301526 Brassica rapa FPsc
Brara.J02567 10.0kb downstream 10.0kb downstream 13837 true A10: 18301527-18315363 Brassica rapa FPsc
Brara.J02567 10.0kb downstream 10.0kb downstream 10000 false A10: 18305364-18315363 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369818 5261 Brassicaceae View MSA
123827807 5264 Brassicales-Malvales View MSA
124351259 5266 SBM View MSA
124252297 5268 Malvidae View MSA
124072628 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier