Gene : Brara.J02444 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR20932:SF8 - PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN Genomic Order:  2444
Name:  ? Brara.J02444 Secondary Identifier:  ? PAC:30612878
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02444 0.5kb upstream 0.5kb upstream 3005 true A10: 17708142-17711146 Brassica rapa FPsc
Brara.J02444 0.5kb upstream 0.5kb upstream 500 false A10: 17710647-17711146 Brassica rapa FPsc
Brara.J02444 0.5kb downstream 0.5kb downstream 3005 true A10: 17707642-17710646 Brassica rapa FPsc
Brara.J02444 0.5kb downstream 0.5kb downstream 500 false A10: 17707642-17708141 Brassica rapa FPsc
Brara.J02444 1.0kb upstream 1.0kb upstream 3505 true A10: 17708142-17711646 Brassica rapa FPsc
Brara.J02444 1.0kb upstream 1.0kb upstream 1000 false A10: 17710647-17711646 Brassica rapa FPsc
Brara.J02444 1.0kb downstream 1.0kb downstream 3505 true A10: 17707142-17710646 Brassica rapa FPsc
Brara.J02444 1.0kb downstream 1.0kb downstream 1000 false A10: 17707142-17708141 Brassica rapa FPsc
Brara.J02444 2.0kb upstream 2.0kb upstream 4505 true A10: 17708142-17712646 Brassica rapa FPsc
Brara.J02444 2.0kb upstream 2.0kb upstream 2000 false A10: 17710647-17712646 Brassica rapa FPsc
Brara.J02444 2.0kb downstream 2.0kb downstream 4505 true A10: 17706142-17710646 Brassica rapa FPsc
Brara.J02444 2.0kb downstream 2.0kb downstream 2000 false A10: 17706142-17708141 Brassica rapa FPsc
Brara.J02444 5.0kb upstream 5.0kb upstream 7505 true A10: 17708142-17715646 Brassica rapa FPsc
Brara.J02444 5.0kb upstream 5.0kb upstream 5000 false A10: 17710647-17715646 Brassica rapa FPsc
Brara.J02444 5.0kb downstream 5.0kb downstream 7505 true A10: 17703142-17710646 Brassica rapa FPsc
Brara.J02444 5.0kb downstream 5.0kb downstream 5000 false A10: 17703142-17708141 Brassica rapa FPsc
Brara.J02444 10.0kb upstream 10.0kb upstream 12505 true A10: 17708142-17720646 Brassica rapa FPsc
Brara.J02444 10.0kb upstream 10.0kb upstream 10000 false A10: 17710647-17720646 Brassica rapa FPsc
Brara.J02444 10.0kb downstream 10.0kb downstream 12505 true A10: 17698142-17710646 Brassica rapa FPsc
Brara.J02444 10.0kb downstream 10.0kb downstream 10000 false A10: 17698142-17708141 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040928 5273 Angiosperm View MSA
122369053 5261 Brassicaceae View MSA
123840359 5264 Brassicales-Malvales View MSA
124346136 5266 SBM View MSA
124254251 5268 Malvidae View MSA
124070010 5270 Rosid View MSA
123744886 5271 Pentapetalae View MSA
122793061 5272 Eudicot View MSA
121350889 5274 Embryophyte View MSA
123426344 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier