Gene : Brara.E02973 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR18901:SF29 - HALOACID DEHALOGENASE-LIKE HYDROLASE Genomic Order:  2973
Name:  ? Brara.E02973 Secondary Identifier:  ? PAC:30624198
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY66-399 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E02973 0.5kb upstream 0.5kb upstream 3639 true A05: 25034824-25038462 Brassica rapa FPsc
Brara.E02973 0.5kb upstream 0.5kb upstream 500 false A05: 25034824-25035323 Brassica rapa FPsc
Brara.E02973 0.5kb downstream 0.5kb downstream 3639 true A05: 25035324-25038962 Brassica rapa FPsc
Brara.E02973 0.5kb downstream 0.5kb downstream 500 false A05: 25038463-25038962 Brassica rapa FPsc
Brara.E02973 1.0kb upstream 1.0kb upstream 4139 true A05: 25034324-25038462 Brassica rapa FPsc
Brara.E02973 1.0kb upstream 1.0kb upstream 1000 false A05: 25034324-25035323 Brassica rapa FPsc
Brara.E02973 1.0kb downstream 1.0kb downstream 4139 true A05: 25035324-25039462 Brassica rapa FPsc
Brara.E02973 1.0kb downstream 1.0kb downstream 1000 false A05: 25038463-25039462 Brassica rapa FPsc
Brara.E02973 2.0kb upstream 2.0kb upstream 5139 true A05: 25033324-25038462 Brassica rapa FPsc
Brara.E02973 2.0kb upstream 2.0kb upstream 2000 false A05: 25033324-25035323 Brassica rapa FPsc
Brara.E02973 2.0kb downstream 2.0kb downstream 5139 true A05: 25035324-25040462 Brassica rapa FPsc
Brara.E02973 2.0kb downstream 2.0kb downstream 2000 false A05: 25038463-25040462 Brassica rapa FPsc
Brara.E02973 5.0kb upstream 5.0kb upstream 8139 true A05: 25030324-25038462 Brassica rapa FPsc
Brara.E02973 5.0kb upstream 5.0kb upstream 5000 false A05: 25030324-25035323 Brassica rapa FPsc
Brara.E02973 5.0kb downstream 5.0kb downstream 8139 true A05: 25035324-25043462 Brassica rapa FPsc
Brara.E02973 5.0kb downstream 5.0kb downstream 5000 false A05: 25038463-25043462 Brassica rapa FPsc
Brara.E02973 10.0kb upstream 10.0kb upstream 13139 true A05: 25025324-25038462 Brassica rapa FPsc
Brara.E02973 10.0kb upstream 10.0kb upstream 10000 false A05: 25025324-25035323 Brassica rapa FPsc
Brara.E02973 10.0kb downstream 10.0kb downstream 13139 true A05: 25035324-25048462 Brassica rapa FPsc
Brara.E02973 10.0kb downstream 10.0kb downstream 10000 false A05: 25038463-25048462 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369544 5261 Brassicaceae View MSA
123827885 5264 Brassicales-Malvales View MSA
124343178 5266 SBM View MSA
124247546 5268 Malvidae View MSA
124063319 5270 Rosid View MSA
123739364 5271 Pentapetalae View MSA
122791357 5272 Eudicot View MSA
122044656 5273 Angiosperm View MSA
121344215 5274 Embryophyte View MSA
123426092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier