Gene : Brara.J02520 B. rapa FPsc v1.3

Defline:  (1 of 2) PTHR10209:SF201 - KAR-UP OXIDOREDUCTASE 1 Genomic Order:  2520
Name:  ? Brara.J02520 Secondary Identifier:  ? PAC:30612331

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY1F-823 Brassica rapa FPsc pathologic  
BrapaFPsc PWY1F-FLAVSYN Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5059 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5152 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6787 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02520 0.5kb upstream 0.5kb upstream 2684 true A10: 18062939-18065622 Brassica rapa FPsc
Brara.J02520 0.5kb upstream 0.5kb upstream 500 false A10: 18062939-18063438 Brassica rapa FPsc
Brara.J02520 0.5kb downstream 0.5kb downstream 2684 true A10: 18063439-18066122 Brassica rapa FPsc
Brara.J02520 0.5kb downstream 0.5kb downstream 500 false A10: 18065623-18066122 Brassica rapa FPsc
Brara.J02520 1.0kb upstream 1.0kb upstream 3184 true A10: 18062439-18065622 Brassica rapa FPsc
Brara.J02520 1.0kb upstream 1.0kb upstream 1000 false A10: 18062439-18063438 Brassica rapa FPsc
Brara.J02520 1.0kb downstream 1.0kb downstream 3184 true A10: 18063439-18066622 Brassica rapa FPsc
Brara.J02520 1.0kb downstream 1.0kb downstream 1000 false A10: 18065623-18066622 Brassica rapa FPsc
Brara.J02520 2.0kb upstream 2.0kb upstream 4184 true A10: 18061439-18065622 Brassica rapa FPsc
Brara.J02520 2.0kb upstream 2.0kb upstream 2000 false A10: 18061439-18063438 Brassica rapa FPsc
Brara.J02520 2.0kb downstream 2.0kb downstream 4184 true A10: 18063439-18067622 Brassica rapa FPsc
Brara.J02520 2.0kb downstream 2.0kb downstream 2000 false A10: 18065623-18067622 Brassica rapa FPsc
Brara.J02520 5.0kb upstream 5.0kb upstream 7184 true A10: 18058439-18065622 Brassica rapa FPsc
Brara.J02520 5.0kb upstream 5.0kb upstream 5000 false A10: 18058439-18063438 Brassica rapa FPsc
Brara.J02520 5.0kb downstream 5.0kb downstream 7184 true A10: 18063439-18070622 Brassica rapa FPsc
Brara.J02520 5.0kb downstream 5.0kb downstream 5000 false A10: 18065623-18070622 Brassica rapa FPsc
Brara.J02520 10.0kb upstream 10.0kb upstream 12184 true A10: 18053439-18065622 Brassica rapa FPsc
Brara.J02520 10.0kb upstream 10.0kb upstream 10000 false A10: 18053439-18063438 Brassica rapa FPsc
Brara.J02520 10.0kb downstream 10.0kb downstream 12184 true A10: 18063439-18075622 Brassica rapa FPsc
Brara.J02520 10.0kb downstream 10.0kb downstream 10000 false A10: 18065623-18075622 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378921 5261 Brassicaceae View MSA
123837487 5264 Brassicales-Malvales View MSA
124349798 5266 SBM View MSA
124248174 5268 Malvidae View MSA
124071702 5270 Rosid View MSA
123753331 5271 Pentapetalae View MSA
122797647 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier