Gene : Brara.C02175 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10210:SF34 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 4 Genomic Order:  2175
Name:  ? Brara.C02175 Secondary Identifier:  ? PAC:30615493
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-662 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02175 0.5kb upstream 0.5kb upstream 2354 true A03: 10912763-10915116 Brassica rapa FPsc
Brara.C02175 0.5kb upstream 0.5kb upstream 500 false A03: 10912763-10913262 Brassica rapa FPsc
Brara.C02175 0.5kb downstream 0.5kb downstream 2354 true A03: 10913263-10915616 Brassica rapa FPsc
Brara.C02175 0.5kb downstream 0.5kb downstream 500 false A03: 10915117-10915616 Brassica rapa FPsc
Brara.C02175 1.0kb upstream 1.0kb upstream 2854 true A03: 10912263-10915116 Brassica rapa FPsc
Brara.C02175 1.0kb upstream 1.0kb upstream 1000 false A03: 10912263-10913262 Brassica rapa FPsc
Brara.C02175 1.0kb downstream 1.0kb downstream 2854 true A03: 10913263-10916116 Brassica rapa FPsc
Brara.C02175 1.0kb downstream 1.0kb downstream 1000 false A03: 10915117-10916116 Brassica rapa FPsc
Brara.C02175 2.0kb upstream 2.0kb upstream 3854 true A03: 10911263-10915116 Brassica rapa FPsc
Brara.C02175 2.0kb upstream 2.0kb upstream 2000 false A03: 10911263-10913262 Brassica rapa FPsc
Brara.C02175 2.0kb downstream 2.0kb downstream 3854 true A03: 10913263-10917116 Brassica rapa FPsc
Brara.C02175 2.0kb downstream 2.0kb downstream 2000 false A03: 10915117-10917116 Brassica rapa FPsc
Brara.C02175 5.0kb upstream 5.0kb upstream 6854 true A03: 10908263-10915116 Brassica rapa FPsc
Brara.C02175 5.0kb upstream 5.0kb upstream 5000 false A03: 10908263-10913262 Brassica rapa FPsc
Brara.C02175 5.0kb downstream 5.0kb downstream 6854 true A03: 10913263-10920116 Brassica rapa FPsc
Brara.C02175 5.0kb downstream 5.0kb downstream 5000 false A03: 10915117-10920116 Brassica rapa FPsc
Brara.C02175 10.0kb upstream 10.0kb upstream 11854 true A03: 10903263-10915116 Brassica rapa FPsc
Brara.C02175 10.0kb upstream 10.0kb upstream 10000 false A03: 10903263-10913262 Brassica rapa FPsc
Brara.C02175 10.0kb downstream 10.0kb downstream 11854 true A03: 10913263-10925116 Brassica rapa FPsc
Brara.C02175 10.0kb downstream 10.0kb downstream 10000 false A03: 10915117-10925116 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372606 5261 Brassicaceae View MSA
123829619 5264 Brassicales-Malvales View MSA
124337787 5266 SBM View MSA
124247414 5268 Malvidae View MSA
124063296 5270 Rosid View MSA
123738822 5271 Pentapetalae View MSA
122786228 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier