Gene : Brara.C02184 B. rapa FPsc v1.3
Defline:  (1 of 5) 4.2.1.33 - 3-isopropylmalate dehydratase / Isopropylmalate isomerase Genomic Order:  2184
Name:  ? Brara.C02184 Secondary Identifier:  ? PAC:30616897
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc BRANCHED-CHAIN-AA-SYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc LEUSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02184 0.5kb upstream 0.5kb upstream 2113 true A03: 10941847-10943959 Brassica rapa FPsc
Brara.C02184 0.5kb upstream 0.5kb upstream 500 false A03: 10941847-10942346 Brassica rapa FPsc
Brara.C02184 0.5kb downstream 0.5kb downstream 2113 true A03: 10942347-10944459 Brassica rapa FPsc
Brara.C02184 0.5kb downstream 0.5kb downstream 500 false A03: 10943960-10944459 Brassica rapa FPsc
Brara.C02184 1.0kb upstream 1.0kb upstream 2613 true A03: 10941347-10943959 Brassica rapa FPsc
Brara.C02184 1.0kb upstream 1.0kb upstream 1000 false A03: 10941347-10942346 Brassica rapa FPsc
Brara.C02184 1.0kb downstream 1.0kb downstream 2613 true A03: 10942347-10944959 Brassica rapa FPsc
Brara.C02184 1.0kb downstream 1.0kb downstream 1000 false A03: 10943960-10944959 Brassica rapa FPsc
Brara.C02184 2.0kb upstream 2.0kb upstream 3613 true A03: 10940347-10943959 Brassica rapa FPsc
Brara.C02184 2.0kb upstream 2.0kb upstream 2000 false A03: 10940347-10942346 Brassica rapa FPsc
Brara.C02184 2.0kb downstream 2.0kb downstream 3613 true A03: 10942347-10945959 Brassica rapa FPsc
Brara.C02184 2.0kb downstream 2.0kb downstream 2000 false A03: 10943960-10945959 Brassica rapa FPsc
Brara.C02184 5.0kb upstream 5.0kb upstream 6613 true A03: 10937347-10943959 Brassica rapa FPsc
Brara.C02184 5.0kb upstream 5.0kb upstream 5000 false A03: 10937347-10942346 Brassica rapa FPsc
Brara.C02184 5.0kb downstream 5.0kb downstream 6613 true A03: 10942347-10948959 Brassica rapa FPsc
Brara.C02184 5.0kb downstream 5.0kb downstream 5000 false A03: 10943960-10948959 Brassica rapa FPsc
Brara.C02184 10.0kb upstream 10.0kb upstream 11613 true A03: 10932347-10943959 Brassica rapa FPsc
Brara.C02184 10.0kb upstream 10.0kb upstream 10000 false A03: 10932347-10942346 Brassica rapa FPsc
Brara.C02184 10.0kb downstream 10.0kb downstream 11613 true A03: 10942347-10953959 Brassica rapa FPsc
Brara.C02184 10.0kb downstream 10.0kb downstream 10000 false A03: 10943960-10953959 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040980 5273 Angiosperm View MSA
122362047 5261 Brassicaceae View MSA
123839118 5264 Brassicales-Malvales View MSA
124338093 5266 SBM View MSA
124250878 5268 Malvidae View MSA
124068442 5270 Rosid View MSA
123736502 5271 Pentapetalae View MSA
122789957 5272 Eudicot View MSA
121345878 5274 Embryophyte View MSA
123423763 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier