Gene : Brara.J02421 B. rapa FPsc v1.3

Defline:  (1 of 191) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  2421
Name:  ? Brara.J02421 Secondary Identifier:  ? PAC:30613771

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02421 0.5kb upstream 0.5kb upstream 2134 true A10: 17627348-17629481 Brassica rapa FPsc
Brara.J02421 0.5kb upstream 0.5kb upstream 500 false A10: 17628982-17629481 Brassica rapa FPsc
Brara.J02421 0.5kb downstream 0.5kb downstream 2134 true A10: 17626848-17628981 Brassica rapa FPsc
Brara.J02421 0.5kb downstream 0.5kb downstream 500 false A10: 17626848-17627347 Brassica rapa FPsc
Brara.J02421 1.0kb upstream 1.0kb upstream 2634 true A10: 17627348-17629981 Brassica rapa FPsc
Brara.J02421 1.0kb upstream 1.0kb upstream 1000 false A10: 17628982-17629981 Brassica rapa FPsc
Brara.J02421 1.0kb downstream 1.0kb downstream 2634 true A10: 17626348-17628981 Brassica rapa FPsc
Brara.J02421 1.0kb downstream 1.0kb downstream 1000 false A10: 17626348-17627347 Brassica rapa FPsc
Brara.J02421 2.0kb upstream 2.0kb upstream 3634 true A10: 17627348-17630981 Brassica rapa FPsc
Brara.J02421 2.0kb upstream 2.0kb upstream 2000 false A10: 17628982-17630981 Brassica rapa FPsc
Brara.J02421 2.0kb downstream 2.0kb downstream 3634 true A10: 17625348-17628981 Brassica rapa FPsc
Brara.J02421 2.0kb downstream 2.0kb downstream 2000 false A10: 17625348-17627347 Brassica rapa FPsc
Brara.J02421 5.0kb upstream 5.0kb upstream 6634 true A10: 17627348-17633981 Brassica rapa FPsc
Brara.J02421 5.0kb upstream 5.0kb upstream 5000 false A10: 17628982-17633981 Brassica rapa FPsc
Brara.J02421 5.0kb downstream 5.0kb downstream 6634 true A10: 17622348-17628981 Brassica rapa FPsc
Brara.J02421 5.0kb downstream 5.0kb downstream 5000 false A10: 17622348-17627347 Brassica rapa FPsc
Brara.J02421 10.0kb upstream 10.0kb upstream 11634 true A10: 17627348-17638981 Brassica rapa FPsc
Brara.J02421 10.0kb upstream 10.0kb upstream 10000 false A10: 17628982-17638981 Brassica rapa FPsc
Brara.J02421 10.0kb downstream 10.0kb downstream 11634 true A10: 17617348-17628981 Brassica rapa FPsc
Brara.J02421 10.0kb downstream 10.0kb downstream 10000 false A10: 17617348-17627347 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364903 5261 Brassicaceae View MSA
123832133 5264 Brassicales-Malvales View MSA
124321776 5266 SBM View MSA
124243300 5268 Malvidae View MSA
124072342 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier