Gene : Brara.J02339 B. rapa FPsc v1.3

Defline:  (1 of 1) PF07719//PF13371//PF13414 - Tetratricopeptide repeat (TPR_2) // Tetratricopeptide repeat (TPR_9) // TPR repeat (TPR_11) Genomic Order:  2339
Name:  ? Brara.J02339 Secondary Identifier:  ? PAC:30612476

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.J02339 0.5kb upstream 0.5kb upstream 2809 true A10: 17300009-17302817 Brassica rapa FPsc
Brara.J02339 0.5kb upstream 0.5kb upstream 500 false A10: 17300009-17300508 Brassica rapa FPsc
Brara.J02339 0.5kb downstream 0.5kb downstream 2809 true A10: 17300509-17303317 Brassica rapa FPsc
Brara.J02339 0.5kb downstream 0.5kb downstream 500 false A10: 17302818-17303317 Brassica rapa FPsc
Brara.J02339 1.0kb upstream 1.0kb upstream 3309 true A10: 17299509-17302817 Brassica rapa FPsc
Brara.J02339 1.0kb upstream 1.0kb upstream 1000 false A10: 17299509-17300508 Brassica rapa FPsc
Brara.J02339 1.0kb downstream 1.0kb downstream 3309 true A10: 17300509-17303817 Brassica rapa FPsc
Brara.J02339 1.0kb downstream 1.0kb downstream 1000 false A10: 17302818-17303817 Brassica rapa FPsc
Brara.J02339 2.0kb upstream 2.0kb upstream 4309 true A10: 17298509-17302817 Brassica rapa FPsc
Brara.J02339 2.0kb upstream 2.0kb upstream 2000 false A10: 17298509-17300508 Brassica rapa FPsc
Brara.J02339 2.0kb downstream 2.0kb downstream 4309 true A10: 17300509-17304817 Brassica rapa FPsc
Brara.J02339 2.0kb downstream 2.0kb downstream 2000 false A10: 17302818-17304817 Brassica rapa FPsc
Brara.J02339 5.0kb upstream 5.0kb upstream 7309 true A10: 17295509-17302817 Brassica rapa FPsc
Brara.J02339 5.0kb upstream 5.0kb upstream 5000 false A10: 17295509-17300508 Brassica rapa FPsc
Brara.J02339 5.0kb downstream 5.0kb downstream 7309 true A10: 17300509-17307817 Brassica rapa FPsc
Brara.J02339 5.0kb downstream 5.0kb downstream 5000 false A10: 17302818-17307817 Brassica rapa FPsc
Brara.J02339 10.0kb upstream 10.0kb upstream 12309 true A10: 17290509-17302817 Brassica rapa FPsc
Brara.J02339 10.0kb upstream 10.0kb upstream 10000 false A10: 17290509-17300508 Brassica rapa FPsc
Brara.J02339 10.0kb downstream 10.0kb downstream 12309 true A10: 17300509-17312817 Brassica rapa FPsc
Brara.J02339 10.0kb downstream 10.0kb downstream 10000 false A10: 17302818-17312817 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365612 5261 Brassicaceae View MSA
123838346 5264 Brassicales-Malvales View MSA
124343835 5266 SBM View MSA
124254049 5268 Malvidae View MSA
124063288 5270 Rosid View MSA
123737789 5271 Pentapetalae View MSA
122790297 5272 Eudicot View MSA
122047040 5273 Angiosperm View MSA
121310683 5274 Embryophyte View MSA
123348108 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier