Gene : Brara.E03286 B. rapa FPsc v1.3
Defline:  (1 of 12) PTHR31917:SF20 - AGENET DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3286
Name:  ? Brara.E03286 Secondary Identifier:  ? PAC:30623779
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03286 0.5kb upstream 0.5kb upstream 4394 true A05: 26610554-26614947 Brassica rapa FPsc
Brara.E03286 0.5kb upstream 0.5kb upstream 500 false A05: 26610554-26611053 Brassica rapa FPsc
Brara.E03286 0.5kb downstream 0.5kb downstream 4394 true A05: 26611054-26615447 Brassica rapa FPsc
Brara.E03286 0.5kb downstream 0.5kb downstream 500 false A05: 26614948-26615447 Brassica rapa FPsc
Brara.E03286 1.0kb upstream 1.0kb upstream 4894 true A05: 26610054-26614947 Brassica rapa FPsc
Brara.E03286 1.0kb upstream 1.0kb upstream 1000 false A05: 26610054-26611053 Brassica rapa FPsc
Brara.E03286 1.0kb downstream 1.0kb downstream 4894 true A05: 26611054-26615947 Brassica rapa FPsc
Brara.E03286 1.0kb downstream 1.0kb downstream 1000 false A05: 26614948-26615947 Brassica rapa FPsc
Brara.E03286 2.0kb upstream 2.0kb upstream 5894 true A05: 26609054-26614947 Brassica rapa FPsc
Brara.E03286 2.0kb upstream 2.0kb upstream 2000 false A05: 26609054-26611053 Brassica rapa FPsc
Brara.E03286 2.0kb downstream 2.0kb downstream 5894 true A05: 26611054-26616947 Brassica rapa FPsc
Brara.E03286 2.0kb downstream 2.0kb downstream 2000 false A05: 26614948-26616947 Brassica rapa FPsc
Brara.E03286 5.0kb upstream 5.0kb upstream 8894 true A05: 26606054-26614947 Brassica rapa FPsc
Brara.E03286 5.0kb upstream 5.0kb upstream 5000 false A05: 26606054-26611053 Brassica rapa FPsc
Brara.E03286 5.0kb downstream 5.0kb downstream 8894 true A05: 26611054-26619947 Brassica rapa FPsc
Brara.E03286 5.0kb downstream 5.0kb downstream 5000 false A05: 26614948-26619947 Brassica rapa FPsc
Brara.E03286 10.0kb upstream 10.0kb upstream 13894 true A05: 26601054-26614947 Brassica rapa FPsc
Brara.E03286 10.0kb upstream 10.0kb upstream 10000 false A05: 26601054-26611053 Brassica rapa FPsc
Brara.E03286 10.0kb downstream 10.0kb downstream 13894 true A05: 26611054-26624947 Brassica rapa FPsc
Brara.E03286 10.0kb downstream 10.0kb downstream 10000 false A05: 26614948-26624947 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122349189 5261 Brassicaceae Singleton cluster - no MSA
123788418 5264 Brassicales-Malvales Singleton cluster - no MSA
124286451 5266 SBM Singleton cluster - no MSA
124140311 5268 Malvidae Singleton cluster - no MSA
124071836 5270 Rosid View MSA
123746152 5271 Pentapetalae View MSA
122796207 5272 Eudicot View MSA
122050823 5273 Angiosperm View MSA
121349360 5274 Embryophyte View MSA
123381286 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier