Gene : Brara.K01288 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR34058:SF1 - OXYGEN-EVOLVING ENHANCER PROTEIN 1-1, CHLOROPLASTIC-RELATED Genomic Order:  20
Name:  ? Brara.K01288 Secondary Identifier:  ? PAC:30623345
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01288 0.5kb upstream 0.5kb upstream 1809 true Scaffold58736: 186194-188002 Brassica rapa FPsc
Brara.K01288 0.5kb upstream 0.5kb upstream 500 false Scaffold58736: 186194-186693 Brassica rapa FPsc
Brara.K01288 0.5kb downstream 0.5kb downstream 1809 true Scaffold58736: 186694-188502 Brassica rapa FPsc
Brara.K01288 0.5kb downstream 0.5kb downstream 500 false Scaffold58736: 188003-188502 Brassica rapa FPsc
Brara.K01288 1.0kb upstream 1.0kb upstream 2309 true Scaffold58736: 185694-188002 Brassica rapa FPsc
Brara.K01288 1.0kb upstream 1.0kb upstream 1000 false Scaffold58736: 185694-186693 Brassica rapa FPsc
Brara.K01288 1.0kb downstream 1.0kb downstream 2309 true Scaffold58736: 186694-189002 Brassica rapa FPsc
Brara.K01288 1.0kb downstream 1.0kb downstream 1000 false Scaffold58736: 188003-189002 Brassica rapa FPsc
Brara.K01288 2.0kb upstream 2.0kb upstream 3309 true Scaffold58736: 184694-188002 Brassica rapa FPsc
Brara.K01288 2.0kb upstream 2.0kb upstream 2000 false Scaffold58736: 184694-186693 Brassica rapa FPsc
Brara.K01288 2.0kb downstream 2.0kb downstream 3309 true Scaffold58736: 186694-190002 Brassica rapa FPsc
Brara.K01288 2.0kb downstream 2.0kb downstream 2000 false Scaffold58736: 188003-190002 Brassica rapa FPsc
Brara.K01288 5.0kb upstream 5.0kb upstream 6309 true Scaffold58736: 181694-188002 Brassica rapa FPsc
Brara.K01288 5.0kb upstream 5.0kb upstream 5000 false Scaffold58736: 181694-186693 Brassica rapa FPsc
Brara.K01288 5.0kb downstream 5.0kb downstream 6309 true Scaffold58736: 186694-193002 Brassica rapa FPsc
Brara.K01288 5.0kb downstream 5.0kb downstream 5000 false Scaffold58736: 188003-193002 Brassica rapa FPsc
Brara.K01288 10.0kb upstream 10.0kb upstream 11309 true Scaffold58736: 176694-188002 Brassica rapa FPsc
Brara.K01288 10.0kb upstream 10.0kb upstream 10000 false Scaffold58736: 176694-186693 Brassica rapa FPsc
Brara.K01288 10.0kb downstream 10.0kb downstream 11309 true Scaffold58736: 186694-198002 Brassica rapa FPsc
Brara.K01288 10.0kb downstream 10.0kb downstream 10000 false Scaffold58736: 188003-198002 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511164 5273 Angiosperm View MSA
122373103 5261 Brassicaceae View MSA
123800493 5264 Brassicales-Malvales View MSA
124297904 5266 SBM View MSA
124149681 5268 Malvidae View MSA
123875439 5270 Rosid View MSA
123459257 5271 Pentapetalae View MSA
122494651 5272 Eudicot View MSA
120784223 5274 Embryophyte View MSA
123425295 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier