Gene : Brara.K01271 B. rapa FPsc v1.3
Defline:  (1 of 2) 6.3.4.21 - Nicotinate phosphoribosyltransferase / Nicotinic acid phosphoribosyltransferase Genomic Order:  3
Name:  ? Brara.K01271 Secondary Identifier:  ? PAC:30623307
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5381 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01271 0.5kb upstream 0.5kb upstream 3332 true Scaffold58736: 23321-26652 Brassica rapa FPsc
Brara.K01271 0.5kb upstream 0.5kb upstream 500 false Scaffold58736: 23321-23820 Brassica rapa FPsc
Brara.K01271 0.5kb downstream 0.5kb downstream 3332 true Scaffold58736: 23821-27152 Brassica rapa FPsc
Brara.K01271 0.5kb downstream 0.5kb downstream 500 false Scaffold58736: 26653-27152 Brassica rapa FPsc
Brara.K01271 1.0kb upstream 1.0kb upstream 3832 true Scaffold58736: 22821-26652 Brassica rapa FPsc
Brara.K01271 1.0kb upstream 1.0kb upstream 1000 false Scaffold58736: 22821-23820 Brassica rapa FPsc
Brara.K01271 1.0kb downstream 1.0kb downstream 3832 true Scaffold58736: 23821-27652 Brassica rapa FPsc
Brara.K01271 1.0kb downstream 1.0kb downstream 1000 false Scaffold58736: 26653-27652 Brassica rapa FPsc
Brara.K01271 2.0kb upstream 2.0kb upstream 4832 true Scaffold58736: 21821-26652 Brassica rapa FPsc
Brara.K01271 2.0kb upstream 2.0kb upstream 2000 false Scaffold58736: 21821-23820 Brassica rapa FPsc
Brara.K01271 2.0kb downstream 2.0kb downstream 4832 true Scaffold58736: 23821-28652 Brassica rapa FPsc
Brara.K01271 2.0kb downstream 2.0kb downstream 2000 false Scaffold58736: 26653-28652 Brassica rapa FPsc
Brara.K01271 5.0kb upstream 5.0kb upstream 7832 true Scaffold58736: 18821-26652 Brassica rapa FPsc
Brara.K01271 5.0kb upstream 5.0kb upstream 5000 false Scaffold58736: 18821-23820 Brassica rapa FPsc
Brara.K01271 5.0kb downstream 5.0kb downstream 7832 true Scaffold58736: 23821-31652 Brassica rapa FPsc
Brara.K01271 5.0kb downstream 5.0kb downstream 5000 false Scaffold58736: 26653-31652 Brassica rapa FPsc
Brara.K01271 10.0kb upstream 10.0kb upstream 12832 true Scaffold58736: 13821-26652 Brassica rapa FPsc
Brara.K01271 10.0kb upstream 10.0kb upstream 10000 false Scaffold58736: 13821-23820 Brassica rapa FPsc
Brara.K01271 10.0kb downstream 10.0kb downstream 12832 true Scaffold58736: 23821-36652 Brassica rapa FPsc
Brara.K01271 10.0kb downstream 10.0kb downstream 10000 false Scaffold58736: 26653-36652 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365718 5261 Brassicaceae View MSA
123799019 5264 Brassicales-Malvales View MSA
124348099 5266 SBM View MSA
124237112 5268 Malvidae View MSA
124065117 5270 Rosid View MSA
123744926 5271 Pentapetalae View MSA
122787936 5272 Eudicot View MSA
122047355 5273 Angiosperm View MSA
121346796 5274 Embryophyte View MSA
123425475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier