Gene : Brara.K00960 B. rapa FPsc v1.3
Defline:  (1 of 22) PTHR10024 - SYNAPTOTAGMIN Genomic Order:  7
Name:  ? Brara.K00960 Secondary Identifier:  ? PAC:30611262
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00960 0.5kb upstream 0.5kb upstream 2517 true Scaffold35100: 47821-50337 Brassica rapa FPsc
Brara.K00960 0.5kb upstream 0.5kb upstream 500 false Scaffold35100: 49838-50337 Brassica rapa FPsc
Brara.K00960 0.5kb downstream 0.5kb downstream 2517 true Scaffold35100: 47321-49837 Brassica rapa FPsc
Brara.K00960 0.5kb downstream 0.5kb downstream 500 false Scaffold35100: 47321-47820 Brassica rapa FPsc
Brara.K00960 1.0kb upstream 1.0kb upstream 3017 true Scaffold35100: 47821-50837 Brassica rapa FPsc
Brara.K00960 1.0kb upstream 1.0kb upstream 1000 false Scaffold35100: 49838-50837 Brassica rapa FPsc
Brara.K00960 1.0kb downstream 1.0kb downstream 3017 true Scaffold35100: 46821-49837 Brassica rapa FPsc
Brara.K00960 1.0kb downstream 1.0kb downstream 1000 false Scaffold35100: 46821-47820 Brassica rapa FPsc
Brara.K00960 2.0kb upstream 2.0kb upstream 4017 true Scaffold35100: 47821-51837 Brassica rapa FPsc
Brara.K00960 2.0kb upstream 2.0kb upstream 2000 false Scaffold35100: 49838-51837 Brassica rapa FPsc
Brara.K00960 2.0kb downstream 2.0kb downstream 4017 true Scaffold35100: 45821-49837 Brassica rapa FPsc
Brara.K00960 2.0kb downstream 2.0kb downstream 2000 false Scaffold35100: 45821-47820 Brassica rapa FPsc
Brara.K00960 5.0kb upstream 5.0kb upstream 7017 true Scaffold35100: 47821-54837 Brassica rapa FPsc
Brara.K00960 5.0kb upstream 5.0kb upstream 5000 false Scaffold35100: 49838-54837 Brassica rapa FPsc
Brara.K00960 5.0kb downstream 5.0kb downstream 7017 true Scaffold35100: 42821-49837 Brassica rapa FPsc
Brara.K00960 5.0kb downstream 5.0kb downstream 5000 false Scaffold35100: 42821-47820 Brassica rapa FPsc
Brara.K00960 10.0kb upstream 10.0kb upstream 12017 true Scaffold35100: 47821-59837 Brassica rapa FPsc
Brara.K00960 10.0kb upstream 10.0kb upstream 10000 false Scaffold35100: 49838-59837 Brassica rapa FPsc
Brara.K00960 10.0kb downstream 10.0kb downstream 12017 true Scaffold35100: 37821-49837 Brassica rapa FPsc
Brara.K00960 10.0kb downstream 10.0kb downstream 10000 false Scaffold35100: 37821-47820 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373221 5261 Brassicaceae View MSA
123832112 5264 Brassicales-Malvales View MSA
124348754 5266 SBM View MSA
124246109 5268 Malvidae View MSA
124073188 5270 Rosid View MSA
123749812 5271 Pentapetalae View MSA
122789001 5272 Eudicot View MSA
122050980 5273 Angiosperm View MSA
121350006 5274 Embryophyte View MSA
123427392 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier