Gene : Brara.K00969 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR33676:SF3 - COLD REGULATED PROTEIN 27 Genomic Order:  16
Name:  ? Brara.K00969 Secondary Identifier:  ? PAC:30611276
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00969 0.5kb upstream 0.5kb upstream 1554 true Scaffold35100: 93943-95496 Brassica rapa FPsc
Brara.K00969 0.5kb upstream 0.5kb upstream 500 false Scaffold35100: 93943-94442 Brassica rapa FPsc
Brara.K00969 0.5kb downstream 0.5kb downstream 1554 true Scaffold35100: 94443-95996 Brassica rapa FPsc
Brara.K00969 0.5kb downstream 0.5kb downstream 500 false Scaffold35100: 95497-95996 Brassica rapa FPsc
Brara.K00969 1.0kb upstream 1.0kb upstream 2054 true Scaffold35100: 93443-95496 Brassica rapa FPsc
Brara.K00969 1.0kb upstream 1.0kb upstream 1000 false Scaffold35100: 93443-94442 Brassica rapa FPsc
Brara.K00969 1.0kb downstream 1.0kb downstream 2054 true Scaffold35100: 94443-96496 Brassica rapa FPsc
Brara.K00969 1.0kb downstream 1.0kb downstream 1000 false Scaffold35100: 95497-96496 Brassica rapa FPsc
Brara.K00969 2.0kb upstream 2.0kb upstream 3054 true Scaffold35100: 92443-95496 Brassica rapa FPsc
Brara.K00969 2.0kb upstream 2.0kb upstream 2000 false Scaffold35100: 92443-94442 Brassica rapa FPsc
Brara.K00969 2.0kb downstream 2.0kb downstream 3054 true Scaffold35100: 94443-97496 Brassica rapa FPsc
Brara.K00969 2.0kb downstream 2.0kb downstream 2000 false Scaffold35100: 95497-97496 Brassica rapa FPsc
Brara.K00969 5.0kb upstream 5.0kb upstream 6054 true Scaffold35100: 89443-95496 Brassica rapa FPsc
Brara.K00969 5.0kb upstream 5.0kb upstream 5000 false Scaffold35100: 89443-94442 Brassica rapa FPsc
Brara.K00969 5.0kb downstream 5.0kb downstream 6054 true Scaffold35100: 94443-100496 Brassica rapa FPsc
Brara.K00969 5.0kb downstream 5.0kb downstream 5000 false Scaffold35100: 95497-100496 Brassica rapa FPsc
Brara.K00969 10.0kb upstream 10.0kb upstream 11054 true Scaffold35100: 84443-95496 Brassica rapa FPsc
Brara.K00969 10.0kb upstream 10.0kb upstream 10000 false Scaffold35100: 84443-94442 Brassica rapa FPsc
Brara.K00969 10.0kb downstream 10.0kb downstream 11054 true Scaffold35100: 94443-105496 Brassica rapa FPsc
Brara.K00969 10.0kb downstream 10.0kb downstream 10000 false Scaffold35100: 95497-105496 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363240 5261 Brassicaceae View MSA
123839012 5264 Brassicales-Malvales View MSA
124349740 5266 SBM View MSA
124245971 5268 Malvidae View MSA
124071591 5270 Rosid View MSA
123751833 5271 Pentapetalae View MSA
122791785 5272 Eudicot View MSA
122049905 5273 Angiosperm View MSA
121311643 5274 Embryophyte View MSA
123348914 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier