Gene : Brara.E03337 B. rapa FPsc v1.3
Defline:  (1 of 3) PF00564//PF03108//PF04434//PF10551 - PB1 domain (PB1) // MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  3337
Name:  ? Brara.E03337 Secondary Identifier:  ? PAC:30624911
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03337 0.5kb upstream 0.5kb upstream 4076 true A05: 26890641-26894716 Brassica rapa FPsc
Brara.E03337 0.5kb upstream 0.5kb upstream 500 false A05: 26890641-26891140 Brassica rapa FPsc
Brara.E03337 0.5kb downstream 0.5kb downstream 4076 true A05: 26891141-26895216 Brassica rapa FPsc
Brara.E03337 0.5kb downstream 0.5kb downstream 500 false A05: 26894717-26895216 Brassica rapa FPsc
Brara.E03337 1.0kb upstream 1.0kb upstream 4576 true A05: 26890141-26894716 Brassica rapa FPsc
Brara.E03337 1.0kb upstream 1.0kb upstream 1000 false A05: 26890141-26891140 Brassica rapa FPsc
Brara.E03337 1.0kb downstream 1.0kb downstream 4576 true A05: 26891141-26895716 Brassica rapa FPsc
Brara.E03337 1.0kb downstream 1.0kb downstream 1000 false A05: 26894717-26895716 Brassica rapa FPsc
Brara.E03337 2.0kb upstream 2.0kb upstream 5576 true A05: 26889141-26894716 Brassica rapa FPsc
Brara.E03337 2.0kb upstream 2.0kb upstream 2000 false A05: 26889141-26891140 Brassica rapa FPsc
Brara.E03337 2.0kb downstream 2.0kb downstream 5576 true A05: 26891141-26896716 Brassica rapa FPsc
Brara.E03337 2.0kb downstream 2.0kb downstream 2000 false A05: 26894717-26896716 Brassica rapa FPsc
Brara.E03337 5.0kb upstream 5.0kb upstream 8576 true A05: 26886141-26894716 Brassica rapa FPsc
Brara.E03337 5.0kb upstream 5.0kb upstream 5000 false A05: 26886141-26891140 Brassica rapa FPsc
Brara.E03337 5.0kb downstream 5.0kb downstream 8576 true A05: 26891141-26899716 Brassica rapa FPsc
Brara.E03337 5.0kb downstream 5.0kb downstream 5000 false A05: 26894717-26899716 Brassica rapa FPsc
Brara.E03337 10.0kb upstream 10.0kb upstream 13576 true A05: 26881141-26894716 Brassica rapa FPsc
Brara.E03337 10.0kb upstream 10.0kb upstream 10000 false A05: 26881141-26891140 Brassica rapa FPsc
Brara.E03337 10.0kb downstream 10.0kb downstream 13576 true A05: 26891141-26904716 Brassica rapa FPsc
Brara.E03337 10.0kb downstream 10.0kb downstream 10000 false A05: 26894717-26904716 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367003 5261 Brassicaceae View MSA
123828792 5264 Brassicales-Malvales View MSA
124338856 5266 SBM View MSA
124250884 5268 Malvidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier