Gene : Brara.K00817 B. rapa FPsc v1.3
Defline:  (1 of 25) PF00069//PF00560//PF08263 - Protein kinase domain (Pkinase) // Leucine Rich Repeat (LRR_1) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  3
Name:  ? Brara.K00817 Secondary Identifier:  ? PAC:30640587
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00817 0.5kb upstream 0.5kb upstream 3308 true Scaffold31002: 26540-29847 Brassica rapa FPsc
Brara.K00817 0.5kb upstream 0.5kb upstream 500 false Scaffold31002: 26540-27039 Brassica rapa FPsc
Brara.K00817 0.5kb downstream 0.5kb downstream 3308 true Scaffold31002: 27040-30347 Brassica rapa FPsc
Brara.K00817 0.5kb downstream 0.5kb downstream 500 false Scaffold31002: 29848-30347 Brassica rapa FPsc
Brara.K00817 1.0kb upstream 1.0kb upstream 3808 true Scaffold31002: 26040-29847 Brassica rapa FPsc
Brara.K00817 1.0kb upstream 1.0kb upstream 1000 false Scaffold31002: 26040-27039 Brassica rapa FPsc
Brara.K00817 1.0kb downstream 1.0kb downstream 3808 true Scaffold31002: 27040-30847 Brassica rapa FPsc
Brara.K00817 1.0kb downstream 1.0kb downstream 1000 false Scaffold31002: 29848-30847 Brassica rapa FPsc
Brara.K00817 2.0kb upstream 2.0kb upstream 4808 true Scaffold31002: 25040-29847 Brassica rapa FPsc
Brara.K00817 2.0kb upstream 2.0kb upstream 2000 false Scaffold31002: 25040-27039 Brassica rapa FPsc
Brara.K00817 2.0kb downstream 2.0kb downstream 4808 true Scaffold31002: 27040-31847 Brassica rapa FPsc
Brara.K00817 2.0kb downstream 2.0kb downstream 2000 false Scaffold31002: 29848-31847 Brassica rapa FPsc
Brara.K00817 5.0kb upstream 5.0kb upstream 7808 true Scaffold31002: 22040-29847 Brassica rapa FPsc
Brara.K00817 5.0kb upstream 5.0kb upstream 5000 false Scaffold31002: 22040-27039 Brassica rapa FPsc
Brara.K00817 5.0kb downstream 5.0kb downstream 7808 true Scaffold31002: 27040-34847 Brassica rapa FPsc
Brara.K00817 5.0kb downstream 5.0kb downstream 5000 false Scaffold31002: 29848-34847 Brassica rapa FPsc
Brara.K00817 10.0kb upstream 10.0kb upstream 12808 true Scaffold31002: 17040-29847 Brassica rapa FPsc
Brara.K00817 10.0kb upstream 10.0kb upstream 10000 false Scaffold31002: 17040-27039 Brassica rapa FPsc
Brara.K00817 10.0kb downstream 10.0kb downstream 12808 true Scaffold31002: 27040-39847 Brassica rapa FPsc
Brara.K00817 10.0kb downstream 10.0kb downstream 10000 false Scaffold31002: 29848-39847 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361260 5261 Brassicaceae View MSA
123837545 5264 Brassicales-Malvales View MSA
124339832 5266 SBM View MSA
124242752 5268 Malvidae View MSA
124063050 5270 Rosid View MSA
123736921 5271 Pentapetalae View MSA
122790705 5272 Eudicot View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier