Gene : Brara.C02843 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR12998:SF0 - TRNA:M(4)X MODIFICATION ENZYME TRM13 HOMOLOG Genomic Order:  2843
Name:  ? Brara.C02843 Secondary Identifier:  ? PAC:30617821
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6829 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02843 0.5kb upstream 0.5kb upstream 2628 true A03: 14602644-14605271 Brassica rapa FPsc
Brara.C02843 0.5kb upstream 0.5kb upstream 500 false A03: 14602644-14603143 Brassica rapa FPsc
Brara.C02843 0.5kb downstream 0.5kb downstream 2628 true A03: 14603144-14605771 Brassica rapa FPsc
Brara.C02843 0.5kb downstream 0.5kb downstream 500 false A03: 14605272-14605771 Brassica rapa FPsc
Brara.C02843 1.0kb upstream 1.0kb upstream 3128 true A03: 14602144-14605271 Brassica rapa FPsc
Brara.C02843 1.0kb upstream 1.0kb upstream 1000 false A03: 14602144-14603143 Brassica rapa FPsc
Brara.C02843 1.0kb downstream 1.0kb downstream 3128 true A03: 14603144-14606271 Brassica rapa FPsc
Brara.C02843 1.0kb downstream 1.0kb downstream 1000 false A03: 14605272-14606271 Brassica rapa FPsc
Brara.C02843 2.0kb upstream 2.0kb upstream 4128 true A03: 14601144-14605271 Brassica rapa FPsc
Brara.C02843 2.0kb upstream 2.0kb upstream 2000 false A03: 14601144-14603143 Brassica rapa FPsc
Brara.C02843 2.0kb downstream 2.0kb downstream 4128 true A03: 14603144-14607271 Brassica rapa FPsc
Brara.C02843 2.0kb downstream 2.0kb downstream 2000 false A03: 14605272-14607271 Brassica rapa FPsc
Brara.C02843 5.0kb upstream 5.0kb upstream 7128 true A03: 14598144-14605271 Brassica rapa FPsc
Brara.C02843 5.0kb upstream 5.0kb upstream 5000 false A03: 14598144-14603143 Brassica rapa FPsc
Brara.C02843 5.0kb downstream 5.0kb downstream 7128 true A03: 14603144-14610271 Brassica rapa FPsc
Brara.C02843 5.0kb downstream 5.0kb downstream 5000 false A03: 14605272-14610271 Brassica rapa FPsc
Brara.C02843 10.0kb upstream 10.0kb upstream 12128 true A03: 14593144-14605271 Brassica rapa FPsc
Brara.C02843 10.0kb upstream 10.0kb upstream 10000 false A03: 14593144-14603143 Brassica rapa FPsc
Brara.C02843 10.0kb downstream 10.0kb downstream 12128 true A03: 14603144-14615271 Brassica rapa FPsc
Brara.C02843 10.0kb downstream 10.0kb downstream 10000 false A03: 14605272-14615271 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366038 5261 Brassicaceae View MSA
123828827 5264 Brassicales-Malvales View MSA
124336653 5266 SBM View MSA
124240790 5268 Malvidae View MSA
124062140 5270 Rosid View MSA
123739890 5271 Pentapetalae View MSA
122785784 5272 Eudicot View MSA
122046541 5273 Angiosperm View MSA
121347915 5274 Embryophyte View MSA
123424709 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier