Gene : Brara.K00509 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR32254:SF4 - EXPRESSED PROTEIN Genomic Order:  6
Name:  ? Brara.K00509 Secondary Identifier:  ? PAC:30636093
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00509 0.5kb upstream 0.5kb upstream 930 true Scaffold19799: 30041-30970 Brassica rapa FPsc
Brara.K00509 0.5kb upstream 0.5kb upstream 500 false Scaffold19799: 30471-30970 Brassica rapa FPsc
Brara.K00509 0.5kb downstream 0.5kb downstream 930 true Scaffold19799: 29541-30470 Brassica rapa FPsc
Brara.K00509 0.5kb downstream 0.5kb downstream 500 false Scaffold19799: 29541-30040 Brassica rapa FPsc
Brara.K00509 1.0kb upstream 1.0kb upstream 1430 true Scaffold19799: 30041-31470 Brassica rapa FPsc
Brara.K00509 1.0kb upstream 1.0kb upstream 1000 false Scaffold19799: 30471-31470 Brassica rapa FPsc
Brara.K00509 1.0kb downstream 1.0kb downstream 1430 true Scaffold19799: 29041-30470 Brassica rapa FPsc
Brara.K00509 1.0kb downstream 1.0kb downstream 1000 false Scaffold19799: 29041-30040 Brassica rapa FPsc
Brara.K00509 2.0kb upstream 2.0kb upstream 2430 true Scaffold19799: 30041-32470 Brassica rapa FPsc
Brara.K00509 2.0kb upstream 2.0kb upstream 2000 false Scaffold19799: 30471-32470 Brassica rapa FPsc
Brara.K00509 2.0kb downstream 2.0kb downstream 2430 true Scaffold19799: 28041-30470 Brassica rapa FPsc
Brara.K00509 2.0kb downstream 2.0kb downstream 2000 false Scaffold19799: 28041-30040 Brassica rapa FPsc
Brara.K00509 5.0kb upstream 5.0kb upstream 5430 true Scaffold19799: 30041-35470 Brassica rapa FPsc
Brara.K00509 5.0kb upstream 5.0kb upstream 5000 false Scaffold19799: 30471-35470 Brassica rapa FPsc
Brara.K00509 5.0kb downstream 5.0kb downstream 5430 true Scaffold19799: 25041-30470 Brassica rapa FPsc
Brara.K00509 5.0kb downstream 5.0kb downstream 5000 false Scaffold19799: 25041-30040 Brassica rapa FPsc
Brara.K00509 10.0kb upstream 10.0kb upstream 10430 true Scaffold19799: 30041-40470 Brassica rapa FPsc
Brara.K00509 10.0kb upstream 10.0kb upstream 10000 false Scaffold19799: 30471-40470 Brassica rapa FPsc
Brara.K00509 10.0kb downstream 10.0kb downstream 10430 true Scaffold19799: 20041-30470 Brassica rapa FPsc
Brara.K00509 10.0kb downstream 10.0kb downstream 10000 false Scaffold19799: 20041-30040 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375387 5261 Brassicaceae View MSA
123800945 5264 Brassicales-Malvales View MSA
124344423 5266 SBM View MSA
124247574 5268 Malvidae View MSA
124064112 5270 Rosid View MSA
123748678 5271 Pentapetalae View MSA
122794910 5272 Eudicot View MSA
122051636 5273 Angiosperm View MSA
121349582 5274 Embryophyte View MSA
123381363 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier