Gene : Brara.K00504 B. rapa FPsc v1.3
Defline:  (1 of 5) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Genomic Order:  1
Name:  ? Brara.K00504 Secondary Identifier:  ? PAC:30636114
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00504 0.5kb upstream 0.5kb upstream 2106 true Scaffold19799: 6343-8448 Brassica rapa FPsc
Brara.K00504 0.5kb upstream 0.5kb upstream 500 false Scaffold19799: 7949-8448 Brassica rapa FPsc
Brara.K00504 0.5kb downstream 0.5kb downstream 2106 true Scaffold19799: 5843-7948 Brassica rapa FPsc
Brara.K00504 0.5kb downstream 0.5kb downstream 500 false Scaffold19799: 5843-6342 Brassica rapa FPsc
Brara.K00504 1.0kb upstream 1.0kb upstream 2606 true Scaffold19799: 6343-8948 Brassica rapa FPsc
Brara.K00504 1.0kb upstream 1.0kb upstream 1000 false Scaffold19799: 7949-8948 Brassica rapa FPsc
Brara.K00504 1.0kb downstream 1.0kb downstream 2606 true Scaffold19799: 5343-7948 Brassica rapa FPsc
Brara.K00504 1.0kb downstream 1.0kb downstream 1000 false Scaffold19799: 5343-6342 Brassica rapa FPsc
Brara.K00504 2.0kb upstream 2.0kb upstream 3606 true Scaffold19799: 6343-9948 Brassica rapa FPsc
Brara.K00504 2.0kb upstream 2.0kb upstream 2000 false Scaffold19799: 7949-9948 Brassica rapa FPsc
Brara.K00504 2.0kb downstream 2.0kb downstream 3606 true Scaffold19799: 4343-7948 Brassica rapa FPsc
Brara.K00504 2.0kb downstream 2.0kb downstream 2000 false Scaffold19799: 4343-6342 Brassica rapa FPsc
Brara.K00504 5.0kb upstream 5.0kb upstream 6606 true Scaffold19799: 6343-12948 Brassica rapa FPsc
Brara.K00504 5.0kb upstream 5.0kb upstream 5000 false Scaffold19799: 7949-12948 Brassica rapa FPsc
Brara.K00504 5.0kb downstream 5.0kb downstream 6606 true Scaffold19799: 1343-7948 Brassica rapa FPsc
Brara.K00504 5.0kb downstream 5.0kb downstream 5000 false Scaffold19799: 1343-6342 Brassica rapa FPsc
Brara.K00504 10.0kb upstream 10.0kb upstream 11606 true Scaffold19799: 6343-17948 Brassica rapa FPsc
Brara.K00504 10.0kb upstream 10.0kb upstream 10000 false Scaffold19799: 7949-17948 Brassica rapa FPsc
Brara.K00504 10.0kb downstream 10.0kb downstream 7948 true Scaffold19799: 1-7948 Brassica rapa FPsc
Brara.K00504 10.0kb downstream 10.0kb downstream 6342 false Scaffold19799: 1-6342 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361426 5261 Brassicaceae View MSA
123833895 5264 Brassicales-Malvales View MSA
124344679 5266 SBM View MSA
124240379 5268 Malvidae View MSA
124068915 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier