Gene : Brara.K00538 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11564:SF16 - SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA Genomic Order:  35
Name:  ? Brara.K00538 Secondary Identifier:  ? PAC:30636105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00538 0.5kb upstream 0.5kb upstream 4472 true Scaffold19799: 275875-280346 Brassica rapa FPsc
Brara.K00538 0.5kb upstream 0.5kb upstream 500 false Scaffold19799: 275875-276374 Brassica rapa FPsc
Brara.K00538 0.5kb downstream 0.5kb downstream 4472 true Scaffold19799: 276375-280846 Brassica rapa FPsc
Brara.K00538 0.5kb downstream 0.5kb downstream 500 false Scaffold19799: 280347-280846 Brassica rapa FPsc
Brara.K00538 1.0kb upstream 1.0kb upstream 4972 true Scaffold19799: 275375-280346 Brassica rapa FPsc
Brara.K00538 1.0kb upstream 1.0kb upstream 1000 false Scaffold19799: 275375-276374 Brassica rapa FPsc
Brara.K00538 1.0kb downstream 1.0kb downstream 4972 true Scaffold19799: 276375-281346 Brassica rapa FPsc
Brara.K00538 1.0kb downstream 1.0kb downstream 1000 false Scaffold19799: 280347-281346 Brassica rapa FPsc
Brara.K00538 2.0kb upstream 2.0kb upstream 5972 true Scaffold19799: 274375-280346 Brassica rapa FPsc
Brara.K00538 2.0kb upstream 2.0kb upstream 2000 false Scaffold19799: 274375-276374 Brassica rapa FPsc
Brara.K00538 2.0kb downstream 2.0kb downstream 5972 true Scaffold19799: 276375-282346 Brassica rapa FPsc
Brara.K00538 2.0kb downstream 2.0kb downstream 2000 false Scaffold19799: 280347-282346 Brassica rapa FPsc
Brara.K00538 5.0kb upstream 5.0kb upstream 8972 true Scaffold19799: 271375-280346 Brassica rapa FPsc
Brara.K00538 5.0kb upstream 5.0kb upstream 5000 false Scaffold19799: 271375-276374 Brassica rapa FPsc
Brara.K00538 5.0kb downstream 5.0kb downstream 8972 true Scaffold19799: 276375-285346 Brassica rapa FPsc
Brara.K00538 5.0kb downstream 5.0kb downstream 5000 false Scaffold19799: 280347-285346 Brassica rapa FPsc
Brara.K00538 10.0kb upstream 10.0kb upstream 13972 true Scaffold19799: 266375-280346 Brassica rapa FPsc
Brara.K00538 10.0kb upstream 10.0kb upstream 10000 false Scaffold19799: 266375-276374 Brassica rapa FPsc
Brara.K00538 10.0kb downstream 10.0kb downstream 13972 true Scaffold19799: 276375-290346 Brassica rapa FPsc
Brara.K00538 10.0kb downstream 10.0kb downstream 10000 false Scaffold19799: 280347-290346 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122352100 5261 Brassicaceae Singleton cluster - no MSA
123842467 5264 Brassicales-Malvales View MSA
124323520 5266 SBM View MSA
124252899 5268 Malvidae View MSA
124061133 5270 Rosid View MSA
123748391 5271 Pentapetalae View MSA
122789994 5272 Eudicot View MSA
122043067 5273 Angiosperm View MSA
121346015 5274 Embryophyte View MSA
123425096 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier