Gene : Brara.K00318 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31356:SF9 - L-ASCORBATE PEROXIDASE 3, PEROXISOMAL Genomic Order:  6
Name:  ? Brara.K00318 Secondary Identifier:  ? PAC:30627548
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-2261 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6959 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00318 0.5kb upstream 0.5kb upstream 2591 true Scaffold14751: 77833-80423 Brassica rapa FPsc
Brara.K00318 0.5kb upstream 0.5kb upstream 500 false Scaffold14751: 77833-78332 Brassica rapa FPsc
Brara.K00318 0.5kb downstream 0.5kb downstream 2591 true Scaffold14751: 78333-80923 Brassica rapa FPsc
Brara.K00318 0.5kb downstream 0.5kb downstream 500 false Scaffold14751: 80424-80923 Brassica rapa FPsc
Brara.K00318 1.0kb upstream 1.0kb upstream 3091 true Scaffold14751: 77333-80423 Brassica rapa FPsc
Brara.K00318 1.0kb upstream 1.0kb upstream 1000 false Scaffold14751: 77333-78332 Brassica rapa FPsc
Brara.K00318 1.0kb downstream 1.0kb downstream 3091 true Scaffold14751: 78333-81423 Brassica rapa FPsc
Brara.K00318 1.0kb downstream 1.0kb downstream 1000 false Scaffold14751: 80424-81423 Brassica rapa FPsc
Brara.K00318 2.0kb upstream 2.0kb upstream 4091 true Scaffold14751: 76333-80423 Brassica rapa FPsc
Brara.K00318 2.0kb upstream 2.0kb upstream 2000 false Scaffold14751: 76333-78332 Brassica rapa FPsc
Brara.K00318 2.0kb downstream 2.0kb downstream 4091 true Scaffold14751: 78333-82423 Brassica rapa FPsc
Brara.K00318 2.0kb downstream 2.0kb downstream 2000 false Scaffold14751: 80424-82423 Brassica rapa FPsc
Brara.K00318 5.0kb upstream 5.0kb upstream 7091 true Scaffold14751: 73333-80423 Brassica rapa FPsc
Brara.K00318 5.0kb upstream 5.0kb upstream 5000 false Scaffold14751: 73333-78332 Brassica rapa FPsc
Brara.K00318 5.0kb downstream 5.0kb downstream 7091 true Scaffold14751: 78333-85423 Brassica rapa FPsc
Brara.K00318 5.0kb downstream 5.0kb downstream 5000 false Scaffold14751: 80424-85423 Brassica rapa FPsc
Brara.K00318 10.0kb upstream 10.0kb upstream 12091 true Scaffold14751: 68333-80423 Brassica rapa FPsc
Brara.K00318 10.0kb upstream 10.0kb upstream 10000 false Scaffold14751: 68333-78332 Brassica rapa FPsc
Brara.K00318 10.0kb downstream 10.0kb downstream 12091 true Scaffold14751: 78333-90423 Brassica rapa FPsc
Brara.K00318 10.0kb downstream 10.0kb downstream 10000 false Scaffold14751: 80424-90423 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363389 5261 Brassicaceae View MSA
123829601 5264 Brassicales-Malvales View MSA
124337112 5266 SBM View MSA
124238515 5268 Malvidae View MSA
124073677 5270 Rosid View MSA
123749016 5271 Pentapetalae View MSA
122789875 5272 Eudicot View MSA
122047258 5273 Angiosperm View MSA
121344023 5274 Embryophyte View MSA
123426233 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier