Gene : Brara.K00314 B. rapa FPsc v1.3
Defline:  (1 of 8) PTHR11465 - CATALASE Genomic Order:  2
Name:  ? Brara.K00314 Secondary Identifier:  ? PAC:30627556
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc DETOX1-PWY Brassica rapa FPsc pathologic  
BrapaFPsc DETOX1-PWY-1 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00314 0.5kb upstream 0.5kb upstream 2842 true Scaffold14751: 38318-41159 Brassica rapa FPsc
Brara.K00314 0.5kb upstream 0.5kb upstream 500 false Scaffold14751: 38318-38817 Brassica rapa FPsc
Brara.K00314 0.5kb downstream 0.5kb downstream 2842 true Scaffold14751: 38818-41659 Brassica rapa FPsc
Brara.K00314 0.5kb downstream 0.5kb downstream 500 false Scaffold14751: 41160-41659 Brassica rapa FPsc
Brara.K00314 1.0kb upstream 1.0kb upstream 3342 true Scaffold14751: 37818-41159 Brassica rapa FPsc
Brara.K00314 1.0kb upstream 1.0kb upstream 1000 false Scaffold14751: 37818-38817 Brassica rapa FPsc
Brara.K00314 1.0kb downstream 1.0kb downstream 3342 true Scaffold14751: 38818-42159 Brassica rapa FPsc
Brara.K00314 1.0kb downstream 1.0kb downstream 1000 false Scaffold14751: 41160-42159 Brassica rapa FPsc
Brara.K00314 2.0kb upstream 2.0kb upstream 4342 true Scaffold14751: 36818-41159 Brassica rapa FPsc
Brara.K00314 2.0kb upstream 2.0kb upstream 2000 false Scaffold14751: 36818-38817 Brassica rapa FPsc
Brara.K00314 2.0kb downstream 2.0kb downstream 4342 true Scaffold14751: 38818-43159 Brassica rapa FPsc
Brara.K00314 2.0kb downstream 2.0kb downstream 2000 false Scaffold14751: 41160-43159 Brassica rapa FPsc
Brara.K00314 5.0kb upstream 5.0kb upstream 7342 true Scaffold14751: 33818-41159 Brassica rapa FPsc
Brara.K00314 5.0kb upstream 5.0kb upstream 5000 false Scaffold14751: 33818-38817 Brassica rapa FPsc
Brara.K00314 5.0kb downstream 5.0kb downstream 7342 true Scaffold14751: 38818-46159 Brassica rapa FPsc
Brara.K00314 5.0kb downstream 5.0kb downstream 5000 false Scaffold14751: 41160-46159 Brassica rapa FPsc
Brara.K00314 10.0kb upstream 10.0kb upstream 12342 true Scaffold14751: 28818-41159 Brassica rapa FPsc
Brara.K00314 10.0kb upstream 10.0kb upstream 10000 false Scaffold14751: 28818-38817 Brassica rapa FPsc
Brara.K00314 10.0kb downstream 10.0kb downstream 12342 true Scaffold14751: 38818-51159 Brassica rapa FPsc
Brara.K00314 10.0kb downstream 10.0kb downstream 10000 false Scaffold14751: 41160-51159 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122367611 5261 Brassicaceae View MSA
123837299 5264 Brassicales-Malvales View MSA
124338278 5266 SBM View MSA
124254242 5268 Malvidae View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier