Gene : Brara.K00430 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR22952:SF210 - DOG1 ALPHA SPLICE VARIANT Genomic Order:  15
Name:  ? Brara.K00430 Secondary Identifier:  ? PAC:30606780
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00430 0.5kb upstream 0.5kb upstream 8670 true Scaffold18850: 66311-74980 Brassica rapa FPsc
Brara.K00430 0.5kb upstream 0.5kb upstream 500 false Scaffold18850: 74481-74980 Brassica rapa FPsc
Brara.K00430 0.5kb downstream 0.5kb downstream 8670 true Scaffold18850: 65811-74480 Brassica rapa FPsc
Brara.K00430 0.5kb downstream 0.5kb downstream 500 false Scaffold18850: 65811-66310 Brassica rapa FPsc
Brara.K00430 1.0kb upstream 1.0kb upstream 9170 true Scaffold18850: 66311-75480 Brassica rapa FPsc
Brara.K00430 1.0kb upstream 1.0kb upstream 1000 false Scaffold18850: 74481-75480 Brassica rapa FPsc
Brara.K00430 1.0kb downstream 1.0kb downstream 9170 true Scaffold18850: 65311-74480 Brassica rapa FPsc
Brara.K00430 1.0kb downstream 1.0kb downstream 1000 false Scaffold18850: 65311-66310 Brassica rapa FPsc
Brara.K00430 2.0kb upstream 2.0kb upstream 10170 true Scaffold18850: 66311-76480 Brassica rapa FPsc
Brara.K00430 2.0kb upstream 2.0kb upstream 2000 false Scaffold18850: 74481-76480 Brassica rapa FPsc
Brara.K00430 2.0kb downstream 2.0kb downstream 10170 true Scaffold18850: 64311-74480 Brassica rapa FPsc
Brara.K00430 2.0kb downstream 2.0kb downstream 2000 false Scaffold18850: 64311-66310 Brassica rapa FPsc
Brara.K00430 5.0kb upstream 5.0kb upstream 13170 true Scaffold18850: 66311-79480 Brassica rapa FPsc
Brara.K00430 5.0kb upstream 5.0kb upstream 5000 false Scaffold18850: 74481-79480 Brassica rapa FPsc
Brara.K00430 5.0kb downstream 5.0kb downstream 13170 true Scaffold18850: 61311-74480 Brassica rapa FPsc
Brara.K00430 5.0kb downstream 5.0kb downstream 5000 false Scaffold18850: 61311-66310 Brassica rapa FPsc
Brara.K00430 10.0kb upstream 10.0kb upstream 18170 true Scaffold18850: 66311-84480 Brassica rapa FPsc
Brara.K00430 10.0kb upstream 10.0kb upstream 10000 false Scaffold18850: 74481-84480 Brassica rapa FPsc
Brara.K00430 10.0kb downstream 10.0kb downstream 18170 true Scaffold18850: 56311-74480 Brassica rapa FPsc
Brara.K00430 10.0kb downstream 10.0kb downstream 10000 false Scaffold18850: 56311-66310 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364818 5261 Brassicaceae View MSA
123798838 5264 Brassicales-Malvales View MSA
124296421 5266 SBM View MSA
124250601 5268 Malvidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier