Gene : Brara.C02778 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR37236:SF1 - AUXIN-BINDING PROTEIN 1 Genomic Order:  2778
Name:  ? Brara.C02778 Secondary Identifier:  ? PAC:30618236
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02778 0.5kb upstream 0.5kb upstream 2085 true A03: 14244311-14246395 Brassica rapa FPsc
Brara.C02778 0.5kb upstream 0.5kb upstream 500 false A03: 14244311-14244810 Brassica rapa FPsc
Brara.C02778 0.5kb downstream 0.5kb downstream 2085 true A03: 14244811-14246895 Brassica rapa FPsc
Brara.C02778 0.5kb downstream 0.5kb downstream 500 false A03: 14246396-14246895 Brassica rapa FPsc
Brara.C02778 1.0kb upstream 1.0kb upstream 2585 true A03: 14243811-14246395 Brassica rapa FPsc
Brara.C02778 1.0kb upstream 1.0kb upstream 1000 false A03: 14243811-14244810 Brassica rapa FPsc
Brara.C02778 1.0kb downstream 1.0kb downstream 2585 true A03: 14244811-14247395 Brassica rapa FPsc
Brara.C02778 1.0kb downstream 1.0kb downstream 1000 false A03: 14246396-14247395 Brassica rapa FPsc
Brara.C02778 2.0kb upstream 2.0kb upstream 3585 true A03: 14242811-14246395 Brassica rapa FPsc
Brara.C02778 2.0kb upstream 2.0kb upstream 2000 false A03: 14242811-14244810 Brassica rapa FPsc
Brara.C02778 2.0kb downstream 2.0kb downstream 3585 true A03: 14244811-14248395 Brassica rapa FPsc
Brara.C02778 2.0kb downstream 2.0kb downstream 2000 false A03: 14246396-14248395 Brassica rapa FPsc
Brara.C02778 5.0kb upstream 5.0kb upstream 6585 true A03: 14239811-14246395 Brassica rapa FPsc
Brara.C02778 5.0kb upstream 5.0kb upstream 5000 false A03: 14239811-14244810 Brassica rapa FPsc
Brara.C02778 5.0kb downstream 5.0kb downstream 6585 true A03: 14244811-14251395 Brassica rapa FPsc
Brara.C02778 5.0kb downstream 5.0kb downstream 5000 false A03: 14246396-14251395 Brassica rapa FPsc
Brara.C02778 10.0kb upstream 10.0kb upstream 11585 true A03: 14234811-14246395 Brassica rapa FPsc
Brara.C02778 10.0kb upstream 10.0kb upstream 10000 false A03: 14234811-14244810 Brassica rapa FPsc
Brara.C02778 10.0kb downstream 10.0kb downstream 11585 true A03: 14244811-14256395 Brassica rapa FPsc
Brara.C02778 10.0kb downstream 10.0kb downstream 10000 false A03: 14246396-14256395 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122347726 5261 Brassicaceae Singleton cluster - no MSA
123787198 5264 Brassicales-Malvales Singleton cluster - no MSA
124285283 5266 SBM Singleton cluster - no MSA
124139344 5268 Malvidae Singleton cluster - no MSA
123866744 5270 Rosid Singleton cluster - no MSA
123754591 5271 Pentapetalae View MSA
122775954 5272 Eudicot View MSA
122049427 5273 Angiosperm View MSA
121346924 5274 Embryophyte View MSA
123426893 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier