Gene : Brara.K00199 B. rapa FPsc v1.3
Defline:  (1 of 6) 1.14.11.12 - Gibberellin-44 dioxygenase / Gibberellin A44 oxidase Genomic Order:  183
Name:  ? Brara.K00199 Secondary Identifier:  ? PAC:30614631
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5035 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00199 0.5kb upstream 0.5kb upstream 1998 true Scaffold10985: 1078051-1080048 Brassica rapa FPsc
Brara.K00199 0.5kb upstream 0.5kb upstream 500 false Scaffold10985: 1078051-1078550 Brassica rapa FPsc
Brara.K00199 0.5kb downstream 0.5kb downstream 1998 true Scaffold10985: 1078551-1080548 Brassica rapa FPsc
Brara.K00199 0.5kb downstream 0.5kb downstream 500 false Scaffold10985: 1080049-1080548 Brassica rapa FPsc
Brara.K00199 1.0kb upstream 1.0kb upstream 2498 true Scaffold10985: 1077551-1080048 Brassica rapa FPsc
Brara.K00199 1.0kb upstream 1.0kb upstream 1000 false Scaffold10985: 1077551-1078550 Brassica rapa FPsc
Brara.K00199 1.0kb downstream 1.0kb downstream 2498 true Scaffold10985: 1078551-1081048 Brassica rapa FPsc
Brara.K00199 1.0kb downstream 1.0kb downstream 1000 false Scaffold10985: 1080049-1081048 Brassica rapa FPsc
Brara.K00199 2.0kb upstream 2.0kb upstream 3498 true Scaffold10985: 1076551-1080048 Brassica rapa FPsc
Brara.K00199 2.0kb upstream 2.0kb upstream 2000 false Scaffold10985: 1076551-1078550 Brassica rapa FPsc
Brara.K00199 2.0kb downstream 2.0kb downstream 3498 true Scaffold10985: 1078551-1082048 Brassica rapa FPsc
Brara.K00199 2.0kb downstream 2.0kb downstream 2000 false Scaffold10985: 1080049-1082048 Brassica rapa FPsc
Brara.K00199 5.0kb upstream 5.0kb upstream 6498 true Scaffold10985: 1073551-1080048 Brassica rapa FPsc
Brara.K00199 5.0kb upstream 5.0kb upstream 5000 false Scaffold10985: 1073551-1078550 Brassica rapa FPsc
Brara.K00199 5.0kb downstream 5.0kb downstream 6498 true Scaffold10985: 1078551-1085048 Brassica rapa FPsc
Brara.K00199 5.0kb downstream 5.0kb downstream 5000 false Scaffold10985: 1080049-1085048 Brassica rapa FPsc
Brara.K00199 10.0kb upstream 10.0kb upstream 11498 true Scaffold10985: 1068551-1080048 Brassica rapa FPsc
Brara.K00199 10.0kb upstream 10.0kb upstream 10000 false Scaffold10985: 1068551-1078550 Brassica rapa FPsc
Brara.K00199 10.0kb downstream 10.0kb downstream 11498 true Scaffold10985: 1078551-1090048 Brassica rapa FPsc
Brara.K00199 10.0kb downstream 10.0kb downstream 10000 false Scaffold10985: 1080049-1090048 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360565 5261 Brassicaceae View MSA
123835975 5264 Brassicales-Malvales View MSA
124339186 5266 SBM View MSA
124247790 5268 Malvidae View MSA
124071928 5270 Rosid View MSA
123748774 5271 Pentapetalae View MSA
122795776 5272 Eudicot View MSA
122047405 5273 Angiosperm View MSA
121349233 5274 Embryophyte View MSA
123381227 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier