Gene : Brara.C02617 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR11200:SF128 - TYPE I INOSITOL 1,4,5-TRISPHOSPHATE 5-PHOSPHATASE 1 Genomic Order:  2617
Name:  ? Brara.C02617 Secondary Identifier:  ? PAC:30618270
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6358 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6363 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6364 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C02617 0.5kb upstream 0.5kb upstream 4084 true A03: 13244834-13248917 Brassica rapa FPsc
Brara.C02617 0.5kb upstream 0.5kb upstream 500 false A03: 13248418-13248917 Brassica rapa FPsc
Brara.C02617 0.5kb downstream 0.5kb downstream 4084 true A03: 13244334-13248417 Brassica rapa FPsc
Brara.C02617 0.5kb downstream 0.5kb downstream 500 false A03: 13244334-13244833 Brassica rapa FPsc
Brara.C02617 1.0kb upstream 1.0kb upstream 4584 true A03: 13244834-13249417 Brassica rapa FPsc
Brara.C02617 1.0kb upstream 1.0kb upstream 1000 false A03: 13248418-13249417 Brassica rapa FPsc
Brara.C02617 1.0kb downstream 1.0kb downstream 4584 true A03: 13243834-13248417 Brassica rapa FPsc
Brara.C02617 1.0kb downstream 1.0kb downstream 1000 false A03: 13243834-13244833 Brassica rapa FPsc
Brara.C02617 2.0kb upstream 2.0kb upstream 5584 true A03: 13244834-13250417 Brassica rapa FPsc
Brara.C02617 2.0kb upstream 2.0kb upstream 2000 false A03: 13248418-13250417 Brassica rapa FPsc
Brara.C02617 2.0kb downstream 2.0kb downstream 5584 true A03: 13242834-13248417 Brassica rapa FPsc
Brara.C02617 2.0kb downstream 2.0kb downstream 2000 false A03: 13242834-13244833 Brassica rapa FPsc
Brara.C02617 5.0kb upstream 5.0kb upstream 8584 true A03: 13244834-13253417 Brassica rapa FPsc
Brara.C02617 5.0kb upstream 5.0kb upstream 5000 false A03: 13248418-13253417 Brassica rapa FPsc
Brara.C02617 5.0kb downstream 5.0kb downstream 8584 true A03: 13239834-13248417 Brassica rapa FPsc
Brara.C02617 5.0kb downstream 5.0kb downstream 5000 false A03: 13239834-13244833 Brassica rapa FPsc
Brara.C02617 10.0kb upstream 10.0kb upstream 13584 true A03: 13244834-13258417 Brassica rapa FPsc
Brara.C02617 10.0kb upstream 10.0kb upstream 10000 false A03: 13248418-13258417 Brassica rapa FPsc
Brara.C02617 10.0kb downstream 10.0kb downstream 13584 true A03: 13234834-13248417 Brassica rapa FPsc
Brara.C02617 10.0kb downstream 10.0kb downstream 10000 false A03: 13234834-13244833 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370213 5261 Brassicaceae View MSA
123839810 5264 Brassicales-Malvales View MSA
124339394 5266 SBM View MSA
124241049 5268 Malvidae View MSA
124064481 5270 Rosid View MSA
123740737 5271 Pentapetalae View MSA
122795494 5272 Eudicot View MSA
122042148 5273 Angiosperm View MSA
121350777 5274 Embryophyte View MSA
123427535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier