Gene : Brara.E03129 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12848:SF16 - REGULATORY-ASSOCIATED PROTEIN OF MTOR Genomic Order:  3129
Name:  ? Brara.E03129 Secondary Identifier:  ? PAC:30624740
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03129 0.5kb upstream 0.5kb upstream 8216 true A05: 25714950-25723165 Brassica rapa FPsc
Brara.E03129 0.5kb upstream 0.5kb upstream 500 false A05: 25714950-25715449 Brassica rapa FPsc
Brara.E03129 0.5kb downstream 0.5kb downstream 8216 true A05: 25715450-25723665 Brassica rapa FPsc
Brara.E03129 0.5kb downstream 0.5kb downstream 500 false A05: 25723166-25723665 Brassica rapa FPsc
Brara.E03129 1.0kb upstream 1.0kb upstream 8716 true A05: 25714450-25723165 Brassica rapa FPsc
Brara.E03129 1.0kb upstream 1.0kb upstream 1000 false A05: 25714450-25715449 Brassica rapa FPsc
Brara.E03129 1.0kb downstream 1.0kb downstream 8716 true A05: 25715450-25724165 Brassica rapa FPsc
Brara.E03129 1.0kb downstream 1.0kb downstream 1000 false A05: 25723166-25724165 Brassica rapa FPsc
Brara.E03129 2.0kb upstream 2.0kb upstream 9716 true A05: 25713450-25723165 Brassica rapa FPsc
Brara.E03129 2.0kb upstream 2.0kb upstream 2000 false A05: 25713450-25715449 Brassica rapa FPsc
Brara.E03129 2.0kb downstream 2.0kb downstream 9716 true A05: 25715450-25725165 Brassica rapa FPsc
Brara.E03129 2.0kb downstream 2.0kb downstream 2000 false A05: 25723166-25725165 Brassica rapa FPsc
Brara.E03129 5.0kb upstream 5.0kb upstream 12716 true A05: 25710450-25723165 Brassica rapa FPsc
Brara.E03129 5.0kb upstream 5.0kb upstream 5000 false A05: 25710450-25715449 Brassica rapa FPsc
Brara.E03129 5.0kb downstream 5.0kb downstream 12716 true A05: 25715450-25728165 Brassica rapa FPsc
Brara.E03129 5.0kb downstream 5.0kb downstream 5000 false A05: 25723166-25728165 Brassica rapa FPsc
Brara.E03129 10.0kb upstream 10.0kb upstream 17716 true A05: 25705450-25723165 Brassica rapa FPsc
Brara.E03129 10.0kb upstream 10.0kb upstream 10000 false A05: 25705450-25715449 Brassica rapa FPsc
Brara.E03129 10.0kb downstream 10.0kb downstream 17716 true A05: 25715450-25733165 Brassica rapa FPsc
Brara.E03129 10.0kb downstream 10.0kb downstream 10000 false A05: 25723166-25733165 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121505125 5273 Angiosperm Singleton cluster - no MSA
122349428 5261 Brassicaceae Singleton cluster - no MSA
123788618 5264 Brassicales-Malvales Singleton cluster - no MSA
124286640 5266 SBM Singleton cluster - no MSA
124140470 5268 Malvidae Singleton cluster - no MSA
123867679 5270 Rosid Singleton cluster - no MSA
123452499 5271 Pentapetalae Singleton cluster - no MSA
122487985 5272 Eudicot Singleton cluster - no MSA
121349402 5274 Embryophyte View MSA
123426169 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier