Gene : Brara.K00308 B. rapa FPsc v1.3
Defline:  (1 of 27) PF04434//PF10551 - SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  1
Name:  ? Brara.K00308 Secondary Identifier:  ? PAC:30620092
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00308 0.5kb upstream 0.5kb upstream 2286 true Scaffold14230: 1-2286 Brassica rapa FPsc
Brara.K00308 0.5kb upstream 0.5kb upstream 426 false Scaffold14230: 1-426 Brassica rapa FPsc
Brara.K00308 0.5kb downstream 0.5kb downstream 2360 true Scaffold14230: 427-2786 Brassica rapa FPsc
Brara.K00308 0.5kb downstream 0.5kb downstream 500 false Scaffold14230: 2287-2786 Brassica rapa FPsc
Brara.K00308 1.0kb upstream 1.0kb upstream 2286 true Scaffold14230: 1-2286 Brassica rapa FPsc
Brara.K00308 1.0kb upstream 1.0kb upstream 426 false Scaffold14230: 1-426 Brassica rapa FPsc
Brara.K00308 1.0kb downstream 1.0kb downstream 2860 true Scaffold14230: 427-3286 Brassica rapa FPsc
Brara.K00308 1.0kb downstream 1.0kb downstream 1000 false Scaffold14230: 2287-3286 Brassica rapa FPsc
Brara.K00308 2.0kb upstream 2.0kb upstream 2286 true Scaffold14230: 1-2286 Brassica rapa FPsc
Brara.K00308 2.0kb upstream 2.0kb upstream 426 false Scaffold14230: 1-426 Brassica rapa FPsc
Brara.K00308 2.0kb downstream 2.0kb downstream 3860 true Scaffold14230: 427-4286 Brassica rapa FPsc
Brara.K00308 2.0kb downstream 2.0kb downstream 2000 false Scaffold14230: 2287-4286 Brassica rapa FPsc
Brara.K00308 5.0kb upstream 5.0kb upstream 2286 true Scaffold14230: 1-2286 Brassica rapa FPsc
Brara.K00308 5.0kb upstream 5.0kb upstream 426 false Scaffold14230: 1-426 Brassica rapa FPsc
Brara.K00308 5.0kb downstream 5.0kb downstream 6860 true Scaffold14230: 427-7286 Brassica rapa FPsc
Brara.K00308 5.0kb downstream 5.0kb downstream 5000 false Scaffold14230: 2287-7286 Brassica rapa FPsc
Brara.K00308 10.0kb upstream 10.0kb upstream 2286 true Scaffold14230: 1-2286 Brassica rapa FPsc
Brara.K00308 10.0kb upstream 10.0kb upstream 426 false Scaffold14230: 1-426 Brassica rapa FPsc
Brara.K00308 10.0kb downstream 10.0kb downstream 7288 true Scaffold14230: 427-7714 Brassica rapa FPsc
Brara.K00308 10.0kb downstream 10.0kb downstream 5428 false Scaffold14230: 2287-7714 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380064 5261 Brassicaceae View MSA
123802541 5264 Brassicales-Malvales View MSA
124299729 5266 SBM View MSA
124255746 5268 Malvidae View MSA
124051474 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier