Gene : Brara.K00079 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10584//PTHR10584:SF162 - SUGAR KINASE Genomic Order:  63
Name:  ? Brara.K00079 Secondary Identifier:  ? PAC:30614653
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6619 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00079 0.5kb upstream 0.5kb upstream 2329 true Scaffold10985: 394403-396731 Brassica rapa FPsc
Brara.K00079 0.5kb upstream 0.5kb upstream 500 false Scaffold10985: 394403-394902 Brassica rapa FPsc
Brara.K00079 0.5kb downstream 0.5kb downstream 2329 true Scaffold10985: 394903-397231 Brassica rapa FPsc
Brara.K00079 0.5kb downstream 0.5kb downstream 500 false Scaffold10985: 396732-397231 Brassica rapa FPsc
Brara.K00079 1.0kb upstream 1.0kb upstream 2829 true Scaffold10985: 393903-396731 Brassica rapa FPsc
Brara.K00079 1.0kb upstream 1.0kb upstream 1000 false Scaffold10985: 393903-394902 Brassica rapa FPsc
Brara.K00079 1.0kb downstream 1.0kb downstream 2829 true Scaffold10985: 394903-397731 Brassica rapa FPsc
Brara.K00079 1.0kb downstream 1.0kb downstream 1000 false Scaffold10985: 396732-397731 Brassica rapa FPsc
Brara.K00079 2.0kb upstream 2.0kb upstream 3829 true Scaffold10985: 392903-396731 Brassica rapa FPsc
Brara.K00079 2.0kb upstream 2.0kb upstream 2000 false Scaffold10985: 392903-394902 Brassica rapa FPsc
Brara.K00079 2.0kb downstream 2.0kb downstream 3829 true Scaffold10985: 394903-398731 Brassica rapa FPsc
Brara.K00079 2.0kb downstream 2.0kb downstream 2000 false Scaffold10985: 396732-398731 Brassica rapa FPsc
Brara.K00079 5.0kb upstream 5.0kb upstream 6829 true Scaffold10985: 389903-396731 Brassica rapa FPsc
Brara.K00079 5.0kb upstream 5.0kb upstream 5000 false Scaffold10985: 389903-394902 Brassica rapa FPsc
Brara.K00079 5.0kb downstream 5.0kb downstream 6829 true Scaffold10985: 394903-401731 Brassica rapa FPsc
Brara.K00079 5.0kb downstream 5.0kb downstream 5000 false Scaffold10985: 396732-401731 Brassica rapa FPsc
Brara.K00079 10.0kb upstream 10.0kb upstream 11829 true Scaffold10985: 384903-396731 Brassica rapa FPsc
Brara.K00079 10.0kb upstream 10.0kb upstream 10000 false Scaffold10985: 384903-394902 Brassica rapa FPsc
Brara.K00079 10.0kb downstream 10.0kb downstream 11829 true Scaffold10985: 394903-406731 Brassica rapa FPsc
Brara.K00079 10.0kb downstream 10.0kb downstream 10000 false Scaffold10985: 396732-406731 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376270 5261 Brassicaceae View MSA
123829390 5264 Brassicales-Malvales View MSA
124337956 5266 SBM View MSA
124242583 5268 Malvidae View MSA
124063069 5270 Rosid View MSA
123736947 5271 Pentapetalae View MSA
122789457 5272 Eudicot View MSA
122045290 5273 Angiosperm View MSA
121350301 5274 Embryophyte View MSA
123427839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier