Gene : Brara.K00138 B. rapa FPsc v1.3
Defline:  (1 of 1) PF00036//PF13202//PF13833 - EF hand (EF-hand_1) // EF hand (EF-hand_5) // EF-hand domain pair (EF-hand_8) Genomic Order:  122
Name:  ? Brara.K00138 Secondary Identifier:  ? PAC:30614722
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K00138 0.5kb upstream 0.5kb upstream 1419 true Scaffold10985: 666183-667601 Brassica rapa FPsc
Brara.K00138 0.5kb upstream 0.5kb upstream 500 false Scaffold10985: 667102-667601 Brassica rapa FPsc
Brara.K00138 0.5kb downstream 0.5kb downstream 1419 true Scaffold10985: 665683-667101 Brassica rapa FPsc
Brara.K00138 0.5kb downstream 0.5kb downstream 500 false Scaffold10985: 665683-666182 Brassica rapa FPsc
Brara.K00138 1.0kb upstream 1.0kb upstream 1919 true Scaffold10985: 666183-668101 Brassica rapa FPsc
Brara.K00138 1.0kb upstream 1.0kb upstream 1000 false Scaffold10985: 667102-668101 Brassica rapa FPsc
Brara.K00138 1.0kb downstream 1.0kb downstream 1919 true Scaffold10985: 665183-667101 Brassica rapa FPsc
Brara.K00138 1.0kb downstream 1.0kb downstream 1000 false Scaffold10985: 665183-666182 Brassica rapa FPsc
Brara.K00138 2.0kb upstream 2.0kb upstream 2919 true Scaffold10985: 666183-669101 Brassica rapa FPsc
Brara.K00138 2.0kb upstream 2.0kb upstream 2000 false Scaffold10985: 667102-669101 Brassica rapa FPsc
Brara.K00138 2.0kb downstream 2.0kb downstream 2919 true Scaffold10985: 664183-667101 Brassica rapa FPsc
Brara.K00138 2.0kb downstream 2.0kb downstream 2000 false Scaffold10985: 664183-666182 Brassica rapa FPsc
Brara.K00138 5.0kb upstream 5.0kb upstream 5919 true Scaffold10985: 666183-672101 Brassica rapa FPsc
Brara.K00138 5.0kb upstream 5.0kb upstream 5000 false Scaffold10985: 667102-672101 Brassica rapa FPsc
Brara.K00138 5.0kb downstream 5.0kb downstream 5919 true Scaffold10985: 661183-667101 Brassica rapa FPsc
Brara.K00138 5.0kb downstream 5.0kb downstream 5000 false Scaffold10985: 661183-666182 Brassica rapa FPsc
Brara.K00138 10.0kb upstream 10.0kb upstream 10919 true Scaffold10985: 666183-677101 Brassica rapa FPsc
Brara.K00138 10.0kb upstream 10.0kb upstream 10000 false Scaffold10985: 667102-677101 Brassica rapa FPsc
Brara.K00138 10.0kb downstream 10.0kb downstream 10919 true Scaffold10985: 656183-667101 Brassica rapa FPsc
Brara.K00138 10.0kb downstream 10.0kb downstream 10000 false Scaffold10985: 656183-666182 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041090 5273 Angiosperm View MSA
122346713 5261 Brassicaceae Singleton cluster - no MSA
123839486 5264 Brassicales-Malvales View MSA
124340481 5266 SBM View MSA
124241308 5268 Malvidae View MSA
124060611 5270 Rosid View MSA
123746519 5271 Pentapetalae View MSA
122793448 5272 Eudicot View MSA
121346825 5274 Embryophyte View MSA
123425898 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier