Gene : Brara.C03283 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR10641:SF524 - ATMYB1 PROTEIN Genomic Order:  3283
Name:  ? Brara.C03283 Secondary Identifier:  ? PAC:30615663
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03283 0.5kb upstream 0.5kb upstream 2638 true A03: 16631379-16634016 Brassica rapa FPsc
Brara.C03283 0.5kb upstream 0.5kb upstream 500 false A03: 16633517-16634016 Brassica rapa FPsc
Brara.C03283 0.5kb downstream 0.5kb downstream 2638 true A03: 16630879-16633516 Brassica rapa FPsc
Brara.C03283 0.5kb downstream 0.5kb downstream 500 false A03: 16630879-16631378 Brassica rapa FPsc
Brara.C03283 1.0kb upstream 1.0kb upstream 3138 true A03: 16631379-16634516 Brassica rapa FPsc
Brara.C03283 1.0kb upstream 1.0kb upstream 1000 false A03: 16633517-16634516 Brassica rapa FPsc
Brara.C03283 1.0kb downstream 1.0kb downstream 3138 true A03: 16630379-16633516 Brassica rapa FPsc
Brara.C03283 1.0kb downstream 1.0kb downstream 1000 false A03: 16630379-16631378 Brassica rapa FPsc
Brara.C03283 2.0kb upstream 2.0kb upstream 4138 true A03: 16631379-16635516 Brassica rapa FPsc
Brara.C03283 2.0kb upstream 2.0kb upstream 2000 false A03: 16633517-16635516 Brassica rapa FPsc
Brara.C03283 2.0kb downstream 2.0kb downstream 4138 true A03: 16629379-16633516 Brassica rapa FPsc
Brara.C03283 2.0kb downstream 2.0kb downstream 2000 false A03: 16629379-16631378 Brassica rapa FPsc
Brara.C03283 5.0kb upstream 5.0kb upstream 7138 true A03: 16631379-16638516 Brassica rapa FPsc
Brara.C03283 5.0kb upstream 5.0kb upstream 5000 false A03: 16633517-16638516 Brassica rapa FPsc
Brara.C03283 5.0kb downstream 5.0kb downstream 7138 true A03: 16626379-16633516 Brassica rapa FPsc
Brara.C03283 5.0kb downstream 5.0kb downstream 5000 false A03: 16626379-16631378 Brassica rapa FPsc
Brara.C03283 10.0kb upstream 10.0kb upstream 12138 true A03: 16631379-16643516 Brassica rapa FPsc
Brara.C03283 10.0kb upstream 10.0kb upstream 10000 false A03: 16633517-16643516 Brassica rapa FPsc
Brara.C03283 10.0kb downstream 10.0kb downstream 12138 true A03: 16621379-16633516 Brassica rapa FPsc
Brara.C03283 10.0kb downstream 10.0kb downstream 10000 false A03: 16621379-16631378 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122346998 5261 Brassicaceae Singleton cluster - no MSA
123786598 5264 Brassicales-Malvales Singleton cluster - no MSA
124284700 5266 SBM Singleton cluster - no MSA
124138861 5268 Malvidae Singleton cluster - no MSA
124065545 5270 Rosid View MSA
123745046 5271 Pentapetalae View MSA
122792993 5272 Eudicot View MSA
122045761 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121346052 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier