Gene : Brara.E03572 B. rapa FPsc v1.3
Defline:  (1 of 3) 5.3.1.8 - Mannose-6-phosphate isomerase / Phosphomannose isomerase Genomic Order:  3572
Name:  ? Brara.E03572 Secondary Identifier:  ? PAC:30625034
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc MANNCAT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3881 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5659 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-882 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03572 0.5kb upstream 0.5kb upstream 2790 true A05: 28025589-28028378 Brassica rapa FPsc
Brara.E03572 0.5kb upstream 0.5kb upstream 500 false A05: 28027879-28028378 Brassica rapa FPsc
Brara.E03572 0.5kb downstream 0.5kb downstream 2790 true A05: 28025089-28027878 Brassica rapa FPsc
Brara.E03572 0.5kb downstream 0.5kb downstream 500 false A05: 28025089-28025588 Brassica rapa FPsc
Brara.E03572 1.0kb upstream 1.0kb upstream 3290 true A05: 28025589-28028878 Brassica rapa FPsc
Brara.E03572 1.0kb upstream 1.0kb upstream 1000 false A05: 28027879-28028878 Brassica rapa FPsc
Brara.E03572 1.0kb downstream 1.0kb downstream 3290 true A05: 28024589-28027878 Brassica rapa FPsc
Brara.E03572 1.0kb downstream 1.0kb downstream 1000 false A05: 28024589-28025588 Brassica rapa FPsc
Brara.E03572 2.0kb upstream 2.0kb upstream 4290 true A05: 28025589-28029878 Brassica rapa FPsc
Brara.E03572 2.0kb upstream 2.0kb upstream 2000 false A05: 28027879-28029878 Brassica rapa FPsc
Brara.E03572 2.0kb downstream 2.0kb downstream 4290 true A05: 28023589-28027878 Brassica rapa FPsc
Brara.E03572 2.0kb downstream 2.0kb downstream 2000 false A05: 28023589-28025588 Brassica rapa FPsc
Brara.E03572 5.0kb upstream 5.0kb upstream 7290 true A05: 28025589-28032878 Brassica rapa FPsc
Brara.E03572 5.0kb upstream 5.0kb upstream 5000 false A05: 28027879-28032878 Brassica rapa FPsc
Brara.E03572 5.0kb downstream 5.0kb downstream 7290 true A05: 28020589-28027878 Brassica rapa FPsc
Brara.E03572 5.0kb downstream 5.0kb downstream 5000 false A05: 28020589-28025588 Brassica rapa FPsc
Brara.E03572 10.0kb upstream 10.0kb upstream 12290 true A05: 28025589-28037878 Brassica rapa FPsc
Brara.E03572 10.0kb upstream 10.0kb upstream 10000 false A05: 28027879-28037878 Brassica rapa FPsc
Brara.E03572 10.0kb downstream 10.0kb downstream 12290 true A05: 28015589-28027878 Brassica rapa FPsc
Brara.E03572 10.0kb downstream 10.0kb downstream 10000 false A05: 28015589-28025588 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361859 5261 Brassicaceae View MSA
123837185 5264 Brassicales-Malvales View MSA
124340778 5266 SBM View MSA
124247259 5268 Malvidae View MSA
124062698 5270 Rosid View MSA
123747047 5271 Pentapetalae View MSA
122796882 5272 Eudicot View MSA
122046941 5273 Angiosperm View MSA
121350841 5274 Embryophyte View MSA
123423837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier