Gene : Brara.E03580 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR23076//PTHR23076:SF61 - METALLOPROTEASE M41 FTSH Genomic Order:  3580
Name:  ? Brara.E03580 Secondary Identifier:  ? PAC:30626790
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03580 0.5kb upstream 0.5kb upstream 2779 true A05: 28044372-28047150 Brassica rapa FPsc
Brara.E03580 0.5kb upstream 0.5kb upstream 500 false A05: 28044372-28044871 Brassica rapa FPsc
Brara.E03580 0.5kb downstream 0.5kb downstream 2779 true A05: 28044872-28047650 Brassica rapa FPsc
Brara.E03580 0.5kb downstream 0.5kb downstream 500 false A05: 28047151-28047650 Brassica rapa FPsc
Brara.E03580 1.0kb upstream 1.0kb upstream 3279 true A05: 28043872-28047150 Brassica rapa FPsc
Brara.E03580 1.0kb upstream 1.0kb upstream 1000 false A05: 28043872-28044871 Brassica rapa FPsc
Brara.E03580 1.0kb downstream 1.0kb downstream 3279 true A05: 28044872-28048150 Brassica rapa FPsc
Brara.E03580 1.0kb downstream 1.0kb downstream 1000 false A05: 28047151-28048150 Brassica rapa FPsc
Brara.E03580 2.0kb upstream 2.0kb upstream 4279 true A05: 28042872-28047150 Brassica rapa FPsc
Brara.E03580 2.0kb upstream 2.0kb upstream 2000 false A05: 28042872-28044871 Brassica rapa FPsc
Brara.E03580 2.0kb downstream 2.0kb downstream 4279 true A05: 28044872-28049150 Brassica rapa FPsc
Brara.E03580 2.0kb downstream 2.0kb downstream 2000 false A05: 28047151-28049150 Brassica rapa FPsc
Brara.E03580 5.0kb upstream 5.0kb upstream 7279 true A05: 28039872-28047150 Brassica rapa FPsc
Brara.E03580 5.0kb upstream 5.0kb upstream 5000 false A05: 28039872-28044871 Brassica rapa FPsc
Brara.E03580 5.0kb downstream 5.0kb downstream 7279 true A05: 28044872-28052150 Brassica rapa FPsc
Brara.E03580 5.0kb downstream 5.0kb downstream 5000 false A05: 28047151-28052150 Brassica rapa FPsc
Brara.E03580 10.0kb upstream 10.0kb upstream 12279 true A05: 28034872-28047150 Brassica rapa FPsc
Brara.E03580 10.0kb upstream 10.0kb upstream 10000 false A05: 28034872-28044871 Brassica rapa FPsc
Brara.E03580 10.0kb downstream 10.0kb downstream 12279 true A05: 28044872-28057150 Brassica rapa FPsc
Brara.E03580 10.0kb downstream 10.0kb downstream 10000 false A05: 28047151-28057150 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374526 5261 Brassicaceae View MSA
123833996 5264 Brassicales-Malvales View MSA
124339955 5266 SBM View MSA
124238677 5268 Malvidae View MSA
124063018 5270 Rosid View MSA
123737747 5271 Pentapetalae View MSA
122793170 5272 Eudicot View MSA
122045675 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121344954 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier