Gene : Brara.C03318 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Genomic Order:  3318
Name:  ? Brara.C03318 Secondary Identifier:  ? PAC:30618738
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6441 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03318 0.5kb upstream 0.5kb upstream 4123 true A03: 16774580-16778702 Brassica rapa FPsc
Brara.C03318 0.5kb upstream 0.5kb upstream 500 false A03: 16774580-16775079 Brassica rapa FPsc
Brara.C03318 0.5kb downstream 0.5kb downstream 4123 true A03: 16775080-16779202 Brassica rapa FPsc
Brara.C03318 0.5kb downstream 0.5kb downstream 500 false A03: 16778703-16779202 Brassica rapa FPsc
Brara.C03318 1.0kb upstream 1.0kb upstream 4623 true A03: 16774080-16778702 Brassica rapa FPsc
Brara.C03318 1.0kb upstream 1.0kb upstream 1000 false A03: 16774080-16775079 Brassica rapa FPsc
Brara.C03318 1.0kb downstream 1.0kb downstream 4623 true A03: 16775080-16779702 Brassica rapa FPsc
Brara.C03318 1.0kb downstream 1.0kb downstream 1000 false A03: 16778703-16779702 Brassica rapa FPsc
Brara.C03318 2.0kb upstream 2.0kb upstream 5623 true A03: 16773080-16778702 Brassica rapa FPsc
Brara.C03318 2.0kb upstream 2.0kb upstream 2000 false A03: 16773080-16775079 Brassica rapa FPsc
Brara.C03318 2.0kb downstream 2.0kb downstream 5623 true A03: 16775080-16780702 Brassica rapa FPsc
Brara.C03318 2.0kb downstream 2.0kb downstream 2000 false A03: 16778703-16780702 Brassica rapa FPsc
Brara.C03318 5.0kb upstream 5.0kb upstream 8623 true A03: 16770080-16778702 Brassica rapa FPsc
Brara.C03318 5.0kb upstream 5.0kb upstream 5000 false A03: 16770080-16775079 Brassica rapa FPsc
Brara.C03318 5.0kb downstream 5.0kb downstream 8623 true A03: 16775080-16783702 Brassica rapa FPsc
Brara.C03318 5.0kb downstream 5.0kb downstream 5000 false A03: 16778703-16783702 Brassica rapa FPsc
Brara.C03318 10.0kb upstream 10.0kb upstream 13623 true A03: 16765080-16778702 Brassica rapa FPsc
Brara.C03318 10.0kb upstream 10.0kb upstream 10000 false A03: 16765080-16775079 Brassica rapa FPsc
Brara.C03318 10.0kb downstream 10.0kb downstream 13623 true A03: 16775080-16788702 Brassica rapa FPsc
Brara.C03318 10.0kb downstream 10.0kb downstream 10000 false A03: 16778703-16788702 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362933 5261 Brassicaceae View MSA
123830834 5264 Brassicales-Malvales View MSA
124341216 5266 SBM View MSA
124237182 5268 Malvidae View MSA
124068541 5270 Rosid View MSA
123736657 5271 Pentapetalae View MSA
122791898 5272 Eudicot View MSA
122046966 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier