Gene : Brara.C03371 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23083:SF397 - UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED Genomic Order:  3371
Name:  ? Brara.C03371 Secondary Identifier:  ? PAC:30618229
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7437 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03371 0.5kb upstream 0.5kb upstream 1995 true A03: 17013075-17015069 Brassica rapa FPsc
Brara.C03371 0.5kb upstream 0.5kb upstream 500 false A03: 17013075-17013574 Brassica rapa FPsc
Brara.C03371 0.5kb downstream 0.5kb downstream 1995 true A03: 17013575-17015569 Brassica rapa FPsc
Brara.C03371 0.5kb downstream 0.5kb downstream 500 false A03: 17015070-17015569 Brassica rapa FPsc
Brara.C03371 1.0kb upstream 1.0kb upstream 2495 true A03: 17012575-17015069 Brassica rapa FPsc
Brara.C03371 1.0kb upstream 1.0kb upstream 1000 false A03: 17012575-17013574 Brassica rapa FPsc
Brara.C03371 1.0kb downstream 1.0kb downstream 2495 true A03: 17013575-17016069 Brassica rapa FPsc
Brara.C03371 1.0kb downstream 1.0kb downstream 1000 false A03: 17015070-17016069 Brassica rapa FPsc
Brara.C03371 2.0kb upstream 2.0kb upstream 3495 true A03: 17011575-17015069 Brassica rapa FPsc
Brara.C03371 2.0kb upstream 2.0kb upstream 2000 false A03: 17011575-17013574 Brassica rapa FPsc
Brara.C03371 2.0kb downstream 2.0kb downstream 3495 true A03: 17013575-17017069 Brassica rapa FPsc
Brara.C03371 2.0kb downstream 2.0kb downstream 2000 false A03: 17015070-17017069 Brassica rapa FPsc
Brara.C03371 5.0kb upstream 5.0kb upstream 6495 true A03: 17008575-17015069 Brassica rapa FPsc
Brara.C03371 5.0kb upstream 5.0kb upstream 5000 false A03: 17008575-17013574 Brassica rapa FPsc
Brara.C03371 5.0kb downstream 5.0kb downstream 6495 true A03: 17013575-17020069 Brassica rapa FPsc
Brara.C03371 5.0kb downstream 5.0kb downstream 5000 false A03: 17015070-17020069 Brassica rapa FPsc
Brara.C03371 10.0kb upstream 10.0kb upstream 11495 true A03: 17003575-17015069 Brassica rapa FPsc
Brara.C03371 10.0kb upstream 10.0kb upstream 10000 false A03: 17003575-17013574 Brassica rapa FPsc
Brara.C03371 10.0kb downstream 10.0kb downstream 11495 true A03: 17013575-17025069 Brassica rapa FPsc
Brara.C03371 10.0kb downstream 10.0kb downstream 10000 false A03: 17015070-17025069 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121781119 5273 Angiosperm View MSA
122347724 5261 Brassicaceae Singleton cluster - no MSA
123787196 5264 Brassicales-Malvales Singleton cluster - no MSA
124285281 5266 SBM Singleton cluster - no MSA
124139342 5268 Malvidae Singleton cluster - no MSA
123866742 5270 Rosid Singleton cluster - no MSA
123748795 5271 Pentapetalae View MSA
122772816 5272 Eudicot View MSA
121052702 5274 Embryophyte View MSA
123427820 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier