Gene : Brara.C03160 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.7.1.6//5.1.3.2 - UDP-glucose 4-epimerase / Uridine diphospho-galactose-4-epimerase Genomic Order:  3160
Name:  ? Brara.C03160 Secondary Identifier:  ? PAC:30615490
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3821 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6527 Brassica rapa FPsc pathologic  
BrapaFPsc PWY66-422 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7344 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03160 0.5kb upstream 0.5kb upstream 3334 true A03: 16053985-16057318 Brassica rapa FPsc
Brara.C03160 0.5kb upstream 0.5kb upstream 500 false A03: 16056819-16057318 Brassica rapa FPsc
Brara.C03160 0.5kb downstream 0.5kb downstream 3334 true A03: 16053485-16056818 Brassica rapa FPsc
Brara.C03160 0.5kb downstream 0.5kb downstream 500 false A03: 16053485-16053984 Brassica rapa FPsc
Brara.C03160 1.0kb upstream 1.0kb upstream 3834 true A03: 16053985-16057818 Brassica rapa FPsc
Brara.C03160 1.0kb upstream 1.0kb upstream 1000 false A03: 16056819-16057818 Brassica rapa FPsc
Brara.C03160 1.0kb downstream 1.0kb downstream 3834 true A03: 16052985-16056818 Brassica rapa FPsc
Brara.C03160 1.0kb downstream 1.0kb downstream 1000 false A03: 16052985-16053984 Brassica rapa FPsc
Brara.C03160 2.0kb upstream 2.0kb upstream 4834 true A03: 16053985-16058818 Brassica rapa FPsc
Brara.C03160 2.0kb upstream 2.0kb upstream 2000 false A03: 16056819-16058818 Brassica rapa FPsc
Brara.C03160 2.0kb downstream 2.0kb downstream 4834 true A03: 16051985-16056818 Brassica rapa FPsc
Brara.C03160 2.0kb downstream 2.0kb downstream 2000 false A03: 16051985-16053984 Brassica rapa FPsc
Brara.C03160 5.0kb upstream 5.0kb upstream 7834 true A03: 16053985-16061818 Brassica rapa FPsc
Brara.C03160 5.0kb upstream 5.0kb upstream 5000 false A03: 16056819-16061818 Brassica rapa FPsc
Brara.C03160 5.0kb downstream 5.0kb downstream 7834 true A03: 16048985-16056818 Brassica rapa FPsc
Brara.C03160 5.0kb downstream 5.0kb downstream 5000 false A03: 16048985-16053984 Brassica rapa FPsc
Brara.C03160 10.0kb upstream 10.0kb upstream 12834 true A03: 16053985-16066818 Brassica rapa FPsc
Brara.C03160 10.0kb upstream 10.0kb upstream 10000 false A03: 16056819-16066818 Brassica rapa FPsc
Brara.C03160 10.0kb downstream 10.0kb downstream 12834 true A03: 16043985-16056818 Brassica rapa FPsc
Brara.C03160 10.0kb downstream 10.0kb downstream 10000 false A03: 16043985-16053984 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364076 5261 Brassicaceae View MSA
123829397 5264 Brassicales-Malvales View MSA
124342034 5266 SBM View MSA
124248055 5268 Malvidae View MSA
124065862 5270 Rosid View MSA
123740112 5271 Pentapetalae View MSA
122791585 5272 Eudicot View MSA
122044418 5273 Angiosperm View MSA
121346867 5274 Embryophyte View MSA
123425103 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier