Gene : Brara.C03179 B. rapa FPsc v1.3
Defline:  (1 of 1) 2.3.1.168 - Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase / Dihydrolipoyl transacylase Genomic Order:  3179
Name:  ? Brara.C03179 Secondary Identifier:  ? PAC:30616624
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5046 Brassica rapa FPsc pathologic  
BrapaFPsc VALDEG-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03179 0.5kb upstream 0.5kb upstream 3272 true A03: 16139811-16143082 Brassica rapa FPsc
Brara.C03179 0.5kb upstream 0.5kb upstream 500 false A03: 16142583-16143082 Brassica rapa FPsc
Brara.C03179 0.5kb downstream 0.5kb downstream 3272 true A03: 16139311-16142582 Brassica rapa FPsc
Brara.C03179 0.5kb downstream 0.5kb downstream 500 false A03: 16139311-16139810 Brassica rapa FPsc
Brara.C03179 1.0kb upstream 1.0kb upstream 3772 true A03: 16139811-16143582 Brassica rapa FPsc
Brara.C03179 1.0kb upstream 1.0kb upstream 1000 false A03: 16142583-16143582 Brassica rapa FPsc
Brara.C03179 1.0kb downstream 1.0kb downstream 3772 true A03: 16138811-16142582 Brassica rapa FPsc
Brara.C03179 1.0kb downstream 1.0kb downstream 1000 false A03: 16138811-16139810 Brassica rapa FPsc
Brara.C03179 2.0kb upstream 2.0kb upstream 4772 true A03: 16139811-16144582 Brassica rapa FPsc
Brara.C03179 2.0kb upstream 2.0kb upstream 2000 false A03: 16142583-16144582 Brassica rapa FPsc
Brara.C03179 2.0kb downstream 2.0kb downstream 4772 true A03: 16137811-16142582 Brassica rapa FPsc
Brara.C03179 2.0kb downstream 2.0kb downstream 2000 false A03: 16137811-16139810 Brassica rapa FPsc
Brara.C03179 5.0kb upstream 5.0kb upstream 7772 true A03: 16139811-16147582 Brassica rapa FPsc
Brara.C03179 5.0kb upstream 5.0kb upstream 5000 false A03: 16142583-16147582 Brassica rapa FPsc
Brara.C03179 5.0kb downstream 5.0kb downstream 7772 true A03: 16134811-16142582 Brassica rapa FPsc
Brara.C03179 5.0kb downstream 5.0kb downstream 5000 false A03: 16134811-16139810 Brassica rapa FPsc
Brara.C03179 10.0kb upstream 10.0kb upstream 12772 true A03: 16139811-16152582 Brassica rapa FPsc
Brara.C03179 10.0kb upstream 10.0kb upstream 10000 false A03: 16142583-16152582 Brassica rapa FPsc
Brara.C03179 10.0kb downstream 10.0kb downstream 12772 true A03: 16129811-16142582 Brassica rapa FPsc
Brara.C03179 10.0kb downstream 10.0kb downstream 10000 false A03: 16129811-16139810 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374576 5261 Brassicaceae View MSA
123833558 5264 Brassicales-Malvales View MSA
124336489 5266 SBM View MSA
124249806 5268 Malvidae View MSA
124066598 5270 Rosid View MSA
123740917 5271 Pentapetalae View MSA
122788338 5272 Eudicot View MSA
122046167 5273 Angiosperm View MSA
121344663 5274 Embryophyte View MSA
123425518 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier