Gene : Brara.C03185 B. rapa FPsc v1.3
Defline:  (1 of 3) PF00564//PF03108//PF04434//PF10551 - PB1 domain (PB1) // MuDR family transposase (DBD_Tnp_Mut) // SWIM zinc finger (SWIM) // MULE transposase domain (MULE) Genomic Order:  3185
Name:  ? Brara.C03185 Secondary Identifier:  ? PAC:30619048
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03185 0.5kb upstream 0.5kb upstream 3859 true A03: 16163482-16167340 Brassica rapa FPsc
Brara.C03185 0.5kb upstream 0.5kb upstream 500 false A03: 16166841-16167340 Brassica rapa FPsc
Brara.C03185 0.5kb downstream 0.5kb downstream 3859 true A03: 16162982-16166840 Brassica rapa FPsc
Brara.C03185 0.5kb downstream 0.5kb downstream 500 false A03: 16162982-16163481 Brassica rapa FPsc
Brara.C03185 1.0kb upstream 1.0kb upstream 4359 true A03: 16163482-16167840 Brassica rapa FPsc
Brara.C03185 1.0kb upstream 1.0kb upstream 1000 false A03: 16166841-16167840 Brassica rapa FPsc
Brara.C03185 1.0kb downstream 1.0kb downstream 4359 true A03: 16162482-16166840 Brassica rapa FPsc
Brara.C03185 1.0kb downstream 1.0kb downstream 1000 false A03: 16162482-16163481 Brassica rapa FPsc
Brara.C03185 2.0kb upstream 2.0kb upstream 5359 true A03: 16163482-16168840 Brassica rapa FPsc
Brara.C03185 2.0kb upstream 2.0kb upstream 2000 false A03: 16166841-16168840 Brassica rapa FPsc
Brara.C03185 2.0kb downstream 2.0kb downstream 5359 true A03: 16161482-16166840 Brassica rapa FPsc
Brara.C03185 2.0kb downstream 2.0kb downstream 2000 false A03: 16161482-16163481 Brassica rapa FPsc
Brara.C03185 5.0kb upstream 5.0kb upstream 8359 true A03: 16163482-16171840 Brassica rapa FPsc
Brara.C03185 5.0kb upstream 5.0kb upstream 5000 false A03: 16166841-16171840 Brassica rapa FPsc
Brara.C03185 5.0kb downstream 5.0kb downstream 8359 true A03: 16158482-16166840 Brassica rapa FPsc
Brara.C03185 5.0kb downstream 5.0kb downstream 5000 false A03: 16158482-16163481 Brassica rapa FPsc
Brara.C03185 10.0kb upstream 10.0kb upstream 13359 true A03: 16163482-16176840 Brassica rapa FPsc
Brara.C03185 10.0kb upstream 10.0kb upstream 10000 false A03: 16166841-16176840 Brassica rapa FPsc
Brara.C03185 10.0kb downstream 10.0kb downstream 13359 true A03: 16153482-16166840 Brassica rapa FPsc
Brara.C03185 10.0kb downstream 10.0kb downstream 10000 false A03: 16153482-16163481 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367644 5261 Brassicaceae View MSA
123837837 5264 Brassicales-Malvales View MSA
124339946 5266 SBM View MSA
124239535 5268 Malvidae View MSA
124072231 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier