Gene : Brara.C03205 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR23315:SF75 - U-BOX DOMAIN-CONTAINING PROTEIN 9 Genomic Order:  3205
Name:  ? Brara.C03205 Secondary Identifier:  ? PAC:30619068
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03205 0.5kb upstream 0.5kb upstream 2522 true A03: 16273469-16275990 Brassica rapa FPsc
Brara.C03205 0.5kb upstream 0.5kb upstream 500 false A03: 16273469-16273968 Brassica rapa FPsc
Brara.C03205 0.5kb downstream 0.5kb downstream 2522 true A03: 16273969-16276490 Brassica rapa FPsc
Brara.C03205 0.5kb downstream 0.5kb downstream 500 false A03: 16275991-16276490 Brassica rapa FPsc
Brara.C03205 1.0kb upstream 1.0kb upstream 3022 true A03: 16272969-16275990 Brassica rapa FPsc
Brara.C03205 1.0kb upstream 1.0kb upstream 1000 false A03: 16272969-16273968 Brassica rapa FPsc
Brara.C03205 1.0kb downstream 1.0kb downstream 3022 true A03: 16273969-16276990 Brassica rapa FPsc
Brara.C03205 1.0kb downstream 1.0kb downstream 1000 false A03: 16275991-16276990 Brassica rapa FPsc
Brara.C03205 2.0kb upstream 2.0kb upstream 4022 true A03: 16271969-16275990 Brassica rapa FPsc
Brara.C03205 2.0kb upstream 2.0kb upstream 2000 false A03: 16271969-16273968 Brassica rapa FPsc
Brara.C03205 2.0kb downstream 2.0kb downstream 4022 true A03: 16273969-16277990 Brassica rapa FPsc
Brara.C03205 2.0kb downstream 2.0kb downstream 2000 false A03: 16275991-16277990 Brassica rapa FPsc
Brara.C03205 5.0kb upstream 5.0kb upstream 7022 true A03: 16268969-16275990 Brassica rapa FPsc
Brara.C03205 5.0kb upstream 5.0kb upstream 5000 false A03: 16268969-16273968 Brassica rapa FPsc
Brara.C03205 5.0kb downstream 5.0kb downstream 7022 true A03: 16273969-16280990 Brassica rapa FPsc
Brara.C03205 5.0kb downstream 5.0kb downstream 5000 false A03: 16275991-16280990 Brassica rapa FPsc
Brara.C03205 10.0kb upstream 10.0kb upstream 12022 true A03: 16263969-16275990 Brassica rapa FPsc
Brara.C03205 10.0kb upstream 10.0kb upstream 10000 false A03: 16263969-16273968 Brassica rapa FPsc
Brara.C03205 10.0kb downstream 10.0kb downstream 12022 true A03: 16273969-16285990 Brassica rapa FPsc
Brara.C03205 10.0kb downstream 10.0kb downstream 10000 false A03: 16275991-16285990 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029179 5273 Angiosperm View MSA
122347955 5261 Brassicaceae Singleton cluster - no MSA
123787385 5264 Brassicales-Malvales Singleton cluster - no MSA
124285461 5266 SBM Singleton cluster - no MSA
124251189 5268 Malvidae View MSA
124071680 5270 Rosid View MSA
123745896 5271 Pentapetalae View MSA
122785914 5272 Eudicot View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier