Gene : Brara.E03511 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23315:SF65 - ARM REPEAT SUPERFAMILY PROTEIN Genomic Order:  3511
Name:  ? Brara.E03511 Secondary Identifier:  ? PAC:30624561
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03511 0.5kb upstream 0.5kb upstream 3406 true A05: 27740363-27743768 Brassica rapa FPsc
Brara.E03511 0.5kb upstream 0.5kb upstream 500 false A05: 27743269-27743768 Brassica rapa FPsc
Brara.E03511 0.5kb downstream 0.5kb downstream 3406 true A05: 27739863-27743268 Brassica rapa FPsc
Brara.E03511 0.5kb downstream 0.5kb downstream 500 false A05: 27739863-27740362 Brassica rapa FPsc
Brara.E03511 1.0kb upstream 1.0kb upstream 3906 true A05: 27740363-27744268 Brassica rapa FPsc
Brara.E03511 1.0kb upstream 1.0kb upstream 1000 false A05: 27743269-27744268 Brassica rapa FPsc
Brara.E03511 1.0kb downstream 1.0kb downstream 3906 true A05: 27739363-27743268 Brassica rapa FPsc
Brara.E03511 1.0kb downstream 1.0kb downstream 1000 false A05: 27739363-27740362 Brassica rapa FPsc
Brara.E03511 2.0kb upstream 2.0kb upstream 4906 true A05: 27740363-27745268 Brassica rapa FPsc
Brara.E03511 2.0kb upstream 2.0kb upstream 2000 false A05: 27743269-27745268 Brassica rapa FPsc
Brara.E03511 2.0kb downstream 2.0kb downstream 4906 true A05: 27738363-27743268 Brassica rapa FPsc
Brara.E03511 2.0kb downstream 2.0kb downstream 2000 false A05: 27738363-27740362 Brassica rapa FPsc
Brara.E03511 5.0kb upstream 5.0kb upstream 7906 true A05: 27740363-27748268 Brassica rapa FPsc
Brara.E03511 5.0kb upstream 5.0kb upstream 5000 false A05: 27743269-27748268 Brassica rapa FPsc
Brara.E03511 5.0kb downstream 5.0kb downstream 7906 true A05: 27735363-27743268 Brassica rapa FPsc
Brara.E03511 5.0kb downstream 5.0kb downstream 5000 false A05: 27735363-27740362 Brassica rapa FPsc
Brara.E03511 10.0kb upstream 10.0kb upstream 12906 true A05: 27740363-27753268 Brassica rapa FPsc
Brara.E03511 10.0kb upstream 10.0kb upstream 10000 false A05: 27743269-27753268 Brassica rapa FPsc
Brara.E03511 10.0kb downstream 10.0kb downstream 12906 true A05: 27730363-27743268 Brassica rapa FPsc
Brara.E03511 10.0kb downstream 10.0kb downstream 10000 false A05: 27730363-27740362 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381591 5261 Brassicaceae View MSA
123841075 5264 Brassicales-Malvales View MSA
124339513 5266 SBM View MSA
124250559 5268 Malvidae View MSA
124062792 5270 Rosid View MSA
123747212 5271 Pentapetalae View MSA
122790234 5272 Eudicot View MSA
122044762 5273 Angiosperm View MSA
121310337 5274 Embryophyte View MSA
123347849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier