Gene : Brara.C03236 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23086:SF29 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 6 Genomic Order:  3236
Name:  ? Brara.C03236 Secondary Identifier:  ? PAC:30616685
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6351 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6352 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03236 0.5kb upstream 0.5kb upstream 3982 true A03: 16378018-16381999 Brassica rapa FPsc
Brara.C03236 0.5kb upstream 0.5kb upstream 500 false A03: 16378018-16378517 Brassica rapa FPsc
Brara.C03236 0.5kb downstream 0.5kb downstream 3982 true A03: 16378518-16382499 Brassica rapa FPsc
Brara.C03236 0.5kb downstream 0.5kb downstream 500 false A03: 16382000-16382499 Brassica rapa FPsc
Brara.C03236 1.0kb upstream 1.0kb upstream 4482 true A03: 16377518-16381999 Brassica rapa FPsc
Brara.C03236 1.0kb upstream 1.0kb upstream 1000 false A03: 16377518-16378517 Brassica rapa FPsc
Brara.C03236 1.0kb downstream 1.0kb downstream 4482 true A03: 16378518-16382999 Brassica rapa FPsc
Brara.C03236 1.0kb downstream 1.0kb downstream 1000 false A03: 16382000-16382999 Brassica rapa FPsc
Brara.C03236 2.0kb upstream 2.0kb upstream 5482 true A03: 16376518-16381999 Brassica rapa FPsc
Brara.C03236 2.0kb upstream 2.0kb upstream 2000 false A03: 16376518-16378517 Brassica rapa FPsc
Brara.C03236 2.0kb downstream 2.0kb downstream 5482 true A03: 16378518-16383999 Brassica rapa FPsc
Brara.C03236 2.0kb downstream 2.0kb downstream 2000 false A03: 16382000-16383999 Brassica rapa FPsc
Brara.C03236 5.0kb upstream 5.0kb upstream 8482 true A03: 16373518-16381999 Brassica rapa FPsc
Brara.C03236 5.0kb upstream 5.0kb upstream 5000 false A03: 16373518-16378517 Brassica rapa FPsc
Brara.C03236 5.0kb downstream 5.0kb downstream 8482 true A03: 16378518-16386999 Brassica rapa FPsc
Brara.C03236 5.0kb downstream 5.0kb downstream 5000 false A03: 16382000-16386999 Brassica rapa FPsc
Brara.C03236 10.0kb upstream 10.0kb upstream 13482 true A03: 16368518-16381999 Brassica rapa FPsc
Brara.C03236 10.0kb upstream 10.0kb upstream 10000 false A03: 16368518-16378517 Brassica rapa FPsc
Brara.C03236 10.0kb downstream 10.0kb downstream 13482 true A03: 16378518-16391999 Brassica rapa FPsc
Brara.C03236 10.0kb downstream 10.0kb downstream 10000 false A03: 16382000-16391999 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362710 5261 Brassicaceae View MSA
123835187 5264 Brassicales-Malvales View MSA
124337249 5266 SBM View MSA
124238892 5268 Malvidae View MSA
124073684 5270 Rosid View MSA
123747330 5271 Pentapetalae View MSA
122788169 5272 Eudicot View MSA
122047903 5273 Angiosperm View MSA
121310813 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier