Gene : Brara.E03549 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR12510 - TROPONIN C-AKIN-1 PROTEIN Genomic Order:  3549
Name:  ? Brara.E03549 Secondary Identifier:  ? PAC:30624993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.E03549 0.5kb upstream 0.5kb upstream 1079 true A05: 27934964-27936042 Brassica rapa FPsc
Brara.E03549 0.5kb upstream 0.5kb upstream 500 false A05: 27935543-27936042 Brassica rapa FPsc
Brara.E03549 0.5kb downstream 0.5kb downstream 1079 true A05: 27934464-27935542 Brassica rapa FPsc
Brara.E03549 0.5kb downstream 0.5kb downstream 500 false A05: 27934464-27934963 Brassica rapa FPsc
Brara.E03549 1.0kb upstream 1.0kb upstream 1579 true A05: 27934964-27936542 Brassica rapa FPsc
Brara.E03549 1.0kb upstream 1.0kb upstream 1000 false A05: 27935543-27936542 Brassica rapa FPsc
Brara.E03549 1.0kb downstream 1.0kb downstream 1579 true A05: 27933964-27935542 Brassica rapa FPsc
Brara.E03549 1.0kb downstream 1.0kb downstream 1000 false A05: 27933964-27934963 Brassica rapa FPsc
Brara.E03549 2.0kb upstream 2.0kb upstream 2579 true A05: 27934964-27937542 Brassica rapa FPsc
Brara.E03549 2.0kb upstream 2.0kb upstream 2000 false A05: 27935543-27937542 Brassica rapa FPsc
Brara.E03549 2.0kb downstream 2.0kb downstream 2579 true A05: 27932964-27935542 Brassica rapa FPsc
Brara.E03549 2.0kb downstream 2.0kb downstream 2000 false A05: 27932964-27934963 Brassica rapa FPsc
Brara.E03549 5.0kb upstream 5.0kb upstream 5579 true A05: 27934964-27940542 Brassica rapa FPsc
Brara.E03549 5.0kb upstream 5.0kb upstream 5000 false A05: 27935543-27940542 Brassica rapa FPsc
Brara.E03549 5.0kb downstream 5.0kb downstream 5579 true A05: 27929964-27935542 Brassica rapa FPsc
Brara.E03549 5.0kb downstream 5.0kb downstream 5000 false A05: 27929964-27934963 Brassica rapa FPsc
Brara.E03549 10.0kb upstream 10.0kb upstream 10579 true A05: 27934964-27945542 Brassica rapa FPsc
Brara.E03549 10.0kb upstream 10.0kb upstream 10000 false A05: 27935543-27945542 Brassica rapa FPsc
Brara.E03549 10.0kb downstream 10.0kb downstream 10579 true A05: 27924964-27935542 Brassica rapa FPsc
Brara.E03549 10.0kb downstream 10.0kb downstream 10000 false A05: 27924964-27934963 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379797 5261 Brassicaceae View MSA
123836280 5264 Brassicales-Malvales View MSA
124340697 5266 SBM View MSA
124246677 5268 Malvidae View MSA
124068981 5270 Rosid View MSA
123739827 5271 Pentapetalae View MSA
122789137 5272 Eudicot View MSA
122047462 5273 Angiosperm View MSA
121349435 5274 Embryophyte View MSA
123425179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier