Gene : Brara.K01757 B. rapa FPsc v1.3
Defline:  (1 of 9) 1.14.13.93 - (+)-abscisic acid 8'-hydroxylase / ABA 8'-hydroxylase Genomic Order:  17
Name:  ? Brara.K01757 Secondary Identifier:  ? PAC:30611213
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5271 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01757 0.5kb upstream 0.5kb upstream 2497 true Scaffold87669: 131664-134160 Brassica rapa FPsc
Brara.K01757 0.5kb upstream 0.5kb upstream 500 false Scaffold87669: 131664-132163 Brassica rapa FPsc
Brara.K01757 0.5kb downstream 0.5kb downstream 2497 true Scaffold87669: 132164-134660 Brassica rapa FPsc
Brara.K01757 0.5kb downstream 0.5kb downstream 500 false Scaffold87669: 134161-134660 Brassica rapa FPsc
Brara.K01757 1.0kb upstream 1.0kb upstream 2997 true Scaffold87669: 131164-134160 Brassica rapa FPsc
Brara.K01757 1.0kb upstream 1.0kb upstream 1000 false Scaffold87669: 131164-132163 Brassica rapa FPsc
Brara.K01757 1.0kb downstream 1.0kb downstream 2997 true Scaffold87669: 132164-135160 Brassica rapa FPsc
Brara.K01757 1.0kb downstream 1.0kb downstream 1000 false Scaffold87669: 134161-135160 Brassica rapa FPsc
Brara.K01757 2.0kb upstream 2.0kb upstream 3997 true Scaffold87669: 130164-134160 Brassica rapa FPsc
Brara.K01757 2.0kb upstream 2.0kb upstream 2000 false Scaffold87669: 130164-132163 Brassica rapa FPsc
Brara.K01757 2.0kb downstream 2.0kb downstream 3997 true Scaffold87669: 132164-136160 Brassica rapa FPsc
Brara.K01757 2.0kb downstream 2.0kb downstream 2000 false Scaffold87669: 134161-136160 Brassica rapa FPsc
Brara.K01757 5.0kb upstream 5.0kb upstream 6997 true Scaffold87669: 127164-134160 Brassica rapa FPsc
Brara.K01757 5.0kb upstream 5.0kb upstream 5000 false Scaffold87669: 127164-132163 Brassica rapa FPsc
Brara.K01757 5.0kb downstream 5.0kb downstream 6997 true Scaffold87669: 132164-139160 Brassica rapa FPsc
Brara.K01757 5.0kb downstream 5.0kb downstream 5000 false Scaffold87669: 134161-139160 Brassica rapa FPsc
Brara.K01757 10.0kb upstream 10.0kb upstream 11997 true Scaffold87669: 122164-134160 Brassica rapa FPsc
Brara.K01757 10.0kb upstream 10.0kb upstream 10000 false Scaffold87669: 122164-132163 Brassica rapa FPsc
Brara.K01757 10.0kb downstream 10.0kb downstream 11997 true Scaffold87669: 132164-144160 Brassica rapa FPsc
Brara.K01757 10.0kb downstream 10.0kb downstream 10000 false Scaffold87669: 134161-144160 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366969 5261 Brassicaceae View MSA
123839116 5264 Brassicales-Malvales View MSA
124341154 5266 SBM View MSA
124251238 5268 Malvidae View MSA
124067549 5270 Rosid View MSA
123747407 5271 Pentapetalae View MSA
122789954 5272 Eudicot View MSA
122044932 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121350004 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier