Gene : Brara.C03082 B. rapa FPsc v1.3
Defline:  (1 of 8) 4.4.1.9 - L-3-cyanoalanine synthase / Beta-cyanoalanine synthase Genomic Order:  3082
Name:  ? Brara.C03082 Secondary Identifier:  ? PAC:30619554
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ASPSYNII-PWY Brassica rapa FPsc pathologic  
BrapaFPsc CYSTSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc P401-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6936 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.C03082 0.5kb upstream 0.5kb upstream 2948 true A03: 15647006-15649953 Brassica rapa FPsc
Brara.C03082 0.5kb upstream 0.5kb upstream 500 false A03: 15647006-15647505 Brassica rapa FPsc
Brara.C03082 0.5kb downstream 0.5kb downstream 2948 true A03: 15647506-15650453 Brassica rapa FPsc
Brara.C03082 0.5kb downstream 0.5kb downstream 500 false A03: 15649954-15650453 Brassica rapa FPsc
Brara.C03082 1.0kb upstream 1.0kb upstream 3448 true A03: 15646506-15649953 Brassica rapa FPsc
Brara.C03082 1.0kb upstream 1.0kb upstream 1000 false A03: 15646506-15647505 Brassica rapa FPsc
Brara.C03082 1.0kb downstream 1.0kb downstream 3448 true A03: 15647506-15650953 Brassica rapa FPsc
Brara.C03082 1.0kb downstream 1.0kb downstream 1000 false A03: 15649954-15650953 Brassica rapa FPsc
Brara.C03082 2.0kb upstream 2.0kb upstream 4448 true A03: 15645506-15649953 Brassica rapa FPsc
Brara.C03082 2.0kb upstream 2.0kb upstream 2000 false A03: 15645506-15647505 Brassica rapa FPsc
Brara.C03082 2.0kb downstream 2.0kb downstream 4448 true A03: 15647506-15651953 Brassica rapa FPsc
Brara.C03082 2.0kb downstream 2.0kb downstream 2000 false A03: 15649954-15651953 Brassica rapa FPsc
Brara.C03082 5.0kb upstream 5.0kb upstream 7448 true A03: 15642506-15649953 Brassica rapa FPsc
Brara.C03082 5.0kb upstream 5.0kb upstream 5000 false A03: 15642506-15647505 Brassica rapa FPsc
Brara.C03082 5.0kb downstream 5.0kb downstream 7448 true A03: 15647506-15654953 Brassica rapa FPsc
Brara.C03082 5.0kb downstream 5.0kb downstream 5000 false A03: 15649954-15654953 Brassica rapa FPsc
Brara.C03082 10.0kb upstream 10.0kb upstream 12448 true A03: 15637506-15649953 Brassica rapa FPsc
Brara.C03082 10.0kb upstream 10.0kb upstream 10000 false A03: 15637506-15647505 Brassica rapa FPsc
Brara.C03082 10.0kb downstream 10.0kb downstream 12448 true A03: 15647506-15659953 Brassica rapa FPsc
Brara.C03082 10.0kb downstream 10.0kb downstream 10000 false A03: 15649954-15659953 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360333 5261 Brassicaceae View MSA
123832468 5264 Brassicales-Malvales View MSA
124351332 5266 SBM View MSA
124251516 5268 Malvidae View MSA
124069374 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier