Gene : Brara.K01825 B. rapa FPsc v1.3
Defline:  (1 of 405) PF01535 - PPR repeat (PPR) Genomic Order:  85
Name:  ? Brara.K01825 Secondary Identifier:  ? PAC:30611190
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01825 0.5kb upstream 0.5kb upstream 1590 true Scaffold87669: 590114-591703 Brassica rapa FPsc
Brara.K01825 0.5kb upstream 0.5kb upstream 500 false Scaffold87669: 591204-591703 Brassica rapa FPsc
Brara.K01825 0.5kb downstream 0.5kb downstream 1590 true Scaffold87669: 589614-591203 Brassica rapa FPsc
Brara.K01825 0.5kb downstream 0.5kb downstream 500 false Scaffold87669: 589614-590113 Brassica rapa FPsc
Brara.K01825 1.0kb upstream 1.0kb upstream 2090 true Scaffold87669: 590114-592203 Brassica rapa FPsc
Brara.K01825 1.0kb upstream 1.0kb upstream 1000 false Scaffold87669: 591204-592203 Brassica rapa FPsc
Brara.K01825 1.0kb downstream 1.0kb downstream 2090 true Scaffold87669: 589114-591203 Brassica rapa FPsc
Brara.K01825 1.0kb downstream 1.0kb downstream 1000 false Scaffold87669: 589114-590113 Brassica rapa FPsc
Brara.K01825 2.0kb upstream 2.0kb upstream 3090 true Scaffold87669: 590114-593203 Brassica rapa FPsc
Brara.K01825 2.0kb upstream 2.0kb upstream 2000 false Scaffold87669: 591204-593203 Brassica rapa FPsc
Brara.K01825 2.0kb downstream 2.0kb downstream 3090 true Scaffold87669: 588114-591203 Brassica rapa FPsc
Brara.K01825 2.0kb downstream 2.0kb downstream 2000 false Scaffold87669: 588114-590113 Brassica rapa FPsc
Brara.K01825 5.0kb upstream 5.0kb upstream 6090 true Scaffold87669: 590114-596203 Brassica rapa FPsc
Brara.K01825 5.0kb upstream 5.0kb upstream 5000 false Scaffold87669: 591204-596203 Brassica rapa FPsc
Brara.K01825 5.0kb downstream 5.0kb downstream 6090 true Scaffold87669: 585114-591203 Brassica rapa FPsc
Brara.K01825 5.0kb downstream 5.0kb downstream 5000 false Scaffold87669: 585114-590113 Brassica rapa FPsc
Brara.K01825 10.0kb upstream 10.0kb upstream 11090 true Scaffold87669: 590114-601203 Brassica rapa FPsc
Brara.K01825 10.0kb upstream 10.0kb upstream 10000 false Scaffold87669: 591204-601203 Brassica rapa FPsc
Brara.K01825 10.0kb downstream 10.0kb downstream 11090 true Scaffold87669: 580114-591203 Brassica rapa FPsc
Brara.K01825 10.0kb downstream 10.0kb downstream 10000 false Scaffold87669: 580114-590113 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345879 5261 Brassicaceae Singleton cluster - no MSA
123839603 5264 Brassicales-Malvales View MSA
124341108 5266 SBM View MSA
124237119 5268 Malvidae View MSA
124068830 5270 Rosid View MSA
123749334 5271 Pentapetalae View MSA
122792381 5272 Eudicot View MSA
122041960 5273 Angiosperm View MSA
121348427 5274 Embryophyte View MSA
123380862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier