Gene : Brara.K01862 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR34190:SF3 - MICROSPORE-SPECIFIC PROMOTER 2 Genomic Order:  4
Name:  ? Brara.K01862 Secondary Identifier:  ? PAC:30623239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.K01862 0.5kb upstream 0.5kb upstream 1575 true Scaffold88831: 25599-27173 Brassica rapa FPsc
Brara.K01862 0.5kb upstream 0.5kb upstream 500 false Scaffold88831: 26674-27173 Brassica rapa FPsc
Brara.K01862 0.5kb downstream 0.5kb downstream 1575 true Scaffold88831: 25099-26673 Brassica rapa FPsc
Brara.K01862 0.5kb downstream 0.5kb downstream 500 false Scaffold88831: 25099-25598 Brassica rapa FPsc
Brara.K01862 1.0kb upstream 1.0kb upstream 2075 true Scaffold88831: 25599-27673 Brassica rapa FPsc
Brara.K01862 1.0kb upstream 1.0kb upstream 1000 false Scaffold88831: 26674-27673 Brassica rapa FPsc
Brara.K01862 1.0kb downstream 1.0kb downstream 2075 true Scaffold88831: 24599-26673 Brassica rapa FPsc
Brara.K01862 1.0kb downstream 1.0kb downstream 1000 false Scaffold88831: 24599-25598 Brassica rapa FPsc
Brara.K01862 2.0kb upstream 2.0kb upstream 3075 true Scaffold88831: 25599-28673 Brassica rapa FPsc
Brara.K01862 2.0kb upstream 2.0kb upstream 2000 false Scaffold88831: 26674-28673 Brassica rapa FPsc
Brara.K01862 2.0kb downstream 2.0kb downstream 3075 true Scaffold88831: 23599-26673 Brassica rapa FPsc
Brara.K01862 2.0kb downstream 2.0kb downstream 2000 false Scaffold88831: 23599-25598 Brassica rapa FPsc
Brara.K01862 5.0kb upstream 5.0kb upstream 6075 true Scaffold88831: 25599-31673 Brassica rapa FPsc
Brara.K01862 5.0kb upstream 5.0kb upstream 5000 false Scaffold88831: 26674-31673 Brassica rapa FPsc
Brara.K01862 5.0kb downstream 5.0kb downstream 6075 true Scaffold88831: 20599-26673 Brassica rapa FPsc
Brara.K01862 5.0kb downstream 5.0kb downstream 5000 false Scaffold88831: 20599-25598 Brassica rapa FPsc
Brara.K01862 10.0kb upstream 10.0kb upstream 11075 true Scaffold88831: 25599-36673 Brassica rapa FPsc
Brara.K01862 10.0kb upstream 10.0kb upstream 10000 false Scaffold88831: 26674-36673 Brassica rapa FPsc
Brara.K01862 10.0kb downstream 10.0kb downstream 11075 true Scaffold88831: 15599-26673 Brassica rapa FPsc
Brara.K01862 10.0kb downstream 10.0kb downstream 10000 false Scaffold88831: 15599-25598 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791974 5273 Angiosperm View MSA
122366672 5261 Brassicaceae View MSA
123829034 5264 Brassicales-Malvales View MSA
124339219 5266 SBM View MSA
124243581 5268 Malvidae View MSA
124068285 5270 Rosid View MSA
123748958 5271 Pentapetalae View MSA
122795694 5272 Eudicot View MSA
121063238 5274 Embryophyte View MSA
123103002 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier